RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 NAT10Q9H0A0 1025 aaKnown RBP14.39□□□□□ -0.11
NEK9-210ENST00000557026 CABP2Q9NPB3 220 aa14.39□□□□□ -0.11
NEK9-210ENST00000557026 SMC3Q9UQE7 1217 aa14.39□□□□□ -0.11
NEK9-210ENST00000557026 IQGAP2Q13576 1575 aa14.38□□□□□ -0.11
NEK9-210ENST00000557026 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
NEK9-210ENST00000557026 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
NEK9-210ENST00000557026 SUPT6HQ7KZ85 1726 aaKnown RBP14.38□□□□□ -0.11
NEK9-210ENST00000557026 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
NEK9-210ENST00000557026 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
NEK9-210ENST00000557026 CDC45O75419 566 aa14.38□□□□□ -0.11
NEK9-210ENST00000557026 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
NEK9-210ENST00000557026 ANKRD1Q15327 319 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 PRXQ9BXM0 1461 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 MYO6Q9UM54 1294 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 IKQ13123 557 aaPredicted RBP14.37□□□□□ -0.11
NEK9-210ENST00000557026 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
NEK9-210ENST00000557026 GNAI2P04899 355 aa14.36□□□□□ -0.11
NEK9-210ENST00000557026 ODF2Q5BJF6 829 aa14.36□□□□□ -0.11
NEK9-210ENST00000557026 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
NEK9-210ENST00000557026 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
NEK9-210ENST00000557026 PCMTD1Q96MG8 357 aaPredicted RBP14.36□□□□□ -0.11
NEK9-210ENST00000557026 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
NEK9-210ENST00000557026 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
NEK9-210ENST00000557026 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
NEK9-210ENST00000557026 A0A087WZG4 1122 aa14.35□□□□□ -0.11
NEK9-210ENST00000557026 MTHFSP49914 203 aa14.35□□□□□ -0.11
NEK9-210ENST00000557026 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
NEK9-210ENST00000557026 TTC39AQ5SRH9 613 aa14.35□□□□□ -0.11
NEK9-210ENST00000557026 CFAP70Q5T0N1 1121 aa14.35□□□□□ -0.11
NEK9-210ENST00000557026 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 FCHSD2O94868 740 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
NEK9-210ENST00000557026 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
NEK9-210ENST00000557026 HDGFL1Q5TGJ6 251 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 OLFM4Q6UX06 510 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 KIF14Q15058 1648 aa14.34□□□□□ -0.11
NEK9-210ENST00000557026 CCDC57Q2TAC2 916 aa14.33□□□□□ -0.11
NEK9-210ENST00000557026 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.11
NEK9-210ENST00000557026 CDKL5O76039 1030 aa14.33□□□□□ -0.12
NEK9-210ENST00000557026 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
NEK9-210ENST00000557026 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
NEK9-210ENST00000557026 DESP17661 470 aa14.33□□□□□ -0.12
NEK9-210ENST00000557026 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
NEK9-210ENST00000557026 AIMP1Q12904 312 aaKnown RBP14.33□□□□□ -0.12
NEK9-210ENST00000557026 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
NEK9-210ENST00000557026 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
NEK9-210ENST00000557026 CDK5RAP3Q96JB5 506 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
NEK9-210ENST00000557026 EPS15P42566 896 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 ABCC11Q96J66 1382 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 TOM1O60784 492 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 LUC7LQ9NQ29 371 aaKnown RBP14.32□□□□□ -0.12
NEK9-210ENST00000557026 COG6Q9Y2V7 657 aa14.32□□□□□ -0.12
NEK9-210ENST00000557026 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 ACBD3Q9H3P7 528 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 HMOX1P09601 288 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 NSD2O96028 1365 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
NEK9-210ENST00000557026 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
NEK9-210ENST00000557026 TWISTNBQ3B726 338 aaPredicted RBP14.31□□□□□ -0.12
NEK9-210ENST00000557026 PPP4R3BQ5MIZ7 849 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
NEK9-210ENST00000557026 WASF1Q92558 559 aa14.31□□□□□ -0.12
NEK9-210ENST00000557026 TMEM132EQ6IEE7 984 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
NEK9-210ENST00000557026 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 KRT32Q14532 448 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 CEP126Q9P2H0 1117 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 CCP110O43303 1012 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
NEK9-210ENST00000557026 NESP48681 1621 aa14.3□□□□□ -0.12
NEK9-210ENST00000557026 OFD1O75665 1012 aa14.29□□□□□ -0.12
NEK9-210ENST00000557026 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
NEK9-210ENST00000557026 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
NEK9-210ENST00000557026 ZPR1O75312 459 aa14.29□□□□□ -0.12
NEK9-210ENST00000557026 ATF7IPQ6VMQ6 1270 aa14.29□□□□□ -0.12
NEK9-210ENST00000557026 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
NEK9-210ENST00000557026 TRAF1Q13077 416 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 FILIP1LQ4L180 1135 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
NEK9-210ENST00000557026 STIM1Q13586 685 aa14.27□□□□□ -0.12
NEK9-210ENST00000557026 TNIP1Q15025 636 aa14.27□□□□□ -0.12
NEK9-210ENST00000557026 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms