RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SMPD1P17405 629 aa11.19□□□□□ -0.62
HIF1A-209ENST00000556827 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-209ENST00000556827 BAP1Q92560 729 aa11.19□□□□□ -0.62
HIF1A-209ENST00000556827 AXIN1O15169 862 aa11.18□□□□□ -0.62
HIF1A-209ENST00000556827 AVPP01185 164 aa11.18□□□□□ -0.62
HIF1A-209ENST00000556827 SH3BP2P78314 561 aa11.18□□□□□ -0.62
HIF1A-209ENST00000556827 FAM117AQ9C073 453 aa11.18□□□□□ -0.62
HIF1A-209ENST00000556827 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
HIF1A-209ENST00000556827 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
HIF1A-209ENST00000556827 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-209ENST00000556827 CTC1Q2NKJ3 1217 aa11.16□□□□□ -0.62
HIF1A-209ENST00000556827 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-209ENST00000556827 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
HIF1A-209ENST00000556827 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
HIF1A-209ENST00000556827 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
HIF1A-209ENST00000556827 SKIV2LQ15477 1246 aaKnown RBP11.14□□□□□ -0.63
HIF1A-209ENST00000556827 SH3D19Q5HYK7 790 aa11.14□□□□□ -0.63
HIF1A-209ENST00000556827 HPS1Q92902 700 aa11.12□□□□□ -0.63
HIF1A-209ENST00000556827 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
HIF1A-209ENST00000556827 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
HIF1A-209ENST00000556827 SIAH2O43255 324 aa11.11□□□□□ -0.63
HIF1A-209ENST00000556827 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-209ENST00000556827 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-209ENST00000556827 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
HIF1A-209ENST00000556827 POTECB2RU33 542 aa11.1□□□□□ -0.63
HIF1A-209ENST00000556827 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
HIF1A-209ENST00000556827 DACH1Q9UI36 760 aa11.1□□□□□ -0.63
HIF1A-209ENST00000556827 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
HIF1A-209ENST00000556827 AGERQ15109 404 aa11.09□□□□□ -0.63
HIF1A-209ENST00000556827 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
HIF1A-209ENST00000556827 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
HIF1A-209ENST00000556827 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
HIF1A-209ENST00000556827 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
HIF1A-209ENST00000556827 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
HIF1A-209ENST00000556827 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
HIF1A-209ENST00000556827 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
HIF1A-209ENST00000556827 BPHLQ86WA6 291 aaPredicted RBP11.04□□□□□ -0.64
HIF1A-209ENST00000556827 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
HIF1A-209ENST00000556827 C11orf95C9JLR9 678 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-209ENST00000556827 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
HIF1A-209ENST00000556827 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
HIF1A-209ENST00000556827 AP1G2O75843 785 aa11.02□□□□□ -0.65
HIF1A-209ENST00000556827 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-209ENST00000556827 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
HIF1A-209ENST00000556827 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
HIF1A-209ENST00000556827 NNTQ13423 1086 aa11□□□□□ -0.65
HIF1A-209ENST00000556827 MPNDQ8N594 471 aa11□□□□□ -0.65
HIF1A-209ENST00000556827 IL27Q8NEV9 243 aa11□□□□□ -0.65
HIF1A-209ENST00000556827 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
HIF1A-209ENST00000556827 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
HIF1A-209ENST00000556827 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
HIF1A-209ENST00000556827 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-209ENST00000556827 ADH1CP00326 375 aa10.99□□□□□ -0.65
HIF1A-209ENST00000556827 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
HIF1A-209ENST00000556827 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
HIF1A-209ENST00000556827 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
HIF1A-209ENST00000556827 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
HIF1A-209ENST00000556827 BMP1P13497 986 aa10.96□□□□□ -0.65
HIF1A-209ENST00000556827 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.65
HIF1A-209ENST00000556827 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
HIF1A-209ENST00000556827 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
HIF1A-209ENST00000556827 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
HIF1A-209ENST00000556827 RFC5P40937 340 aa10.95□□□□□ -0.66
HIF1A-209ENST00000556827 NR6A1Q15406 480 aa10.95□□□□□ -0.66
HIF1A-209ENST00000556827 FKBPLQ9UIM3 349 aa10.95□□□□□ -0.66
HIF1A-209ENST00000556827 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
HIF1A-209ENST00000556827 SH3RF1Q7Z6J0 888 aa10.94□□□□□ -0.66
HIF1A-209ENST00000556827 TRIM47Q96LD4 638 aa10.94□□□□□ -0.66
HIF1A-209ENST00000556827 C1QTNF2Q9BXJ5 285 aa10.94□□□□□ -0.66
HIF1A-209ENST00000556827 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
HIF1A-209ENST00000556827 SNRPBP14678 240 aaKnown RBP10.92□□□□□ -0.66
HIF1A-209ENST00000556827 NR5A1Q13285 461 aa10.92□□□□□ -0.66
HIF1A-209ENST00000556827 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
HIF1A-209ENST00000556827 ARHGAP9Q9BRR9 750 aa10.92□□□□□ -0.66
HIF1A-209ENST00000556827 FSHRP23945 695 aa10.91□□□□□ -0.66
HIF1A-209ENST00000556827 PDXDC2PQ6P474 469 aa10.91□□□□□ -0.66
HIF1A-209ENST00000556827 VASH1Q7L8A9 365 aaPredicted RBP10.91□□□□□ -0.66
HIF1A-209ENST00000556827 ZC3H4Q9UPT8 1303 aaKnown RBP10.9□□□□□ -0.66
HIF1A-209ENST00000556827 TIMP2P16035 220 aa10.9□□□□□ -0.66
HIF1A-209ENST00000556827 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
HIF1A-209ENST00000556827 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
HIF1A-209ENST00000556827 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-209ENST00000556827 NR3C2P08235 984 aa10.89□□□□□ -0.67
HIF1A-209ENST00000556827 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
HIF1A-209ENST00000556827 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
HIF1A-209ENST00000556827 ZIC2O95409 532 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-209ENST00000556827 GRM5P41594 1212 aa10.88□□□□□ -0.67
HIF1A-209ENST00000556827 TMEM259Q4ZIN3 620 aa10.88□□□□□ -0.67
HIF1A-209ENST00000556827 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
HIF1A-209ENST00000556827 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
HIF1A-209ENST00000556827 PTK2Q05397 1052 aa10.87□□□□□ -0.67
HIF1A-209ENST00000556827 EPS8L1Q8TE68 723 aa10.87□□□□□ -0.67
HIF1A-209ENST00000556827 SCARF1Q14162 830 aa10.86□□□□□ -0.67
HIF1A-209ENST00000556827 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
HIF1A-209ENST00000556827 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
HIF1A-209ENST00000556827 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
HIF1A-209ENST00000556827 MRPL14Q6P1L8 145 aaKnown RBP10.85□□□□□ -0.67
HIF1A-209ENST00000556827 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
HIF1A-209ENST00000556827 CCDC116Q8IYX3 515 aa10.83□□□□□ -0.68
HIF1A-209ENST00000556827 PURBQ96QR8 312 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms