RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 TRIM5Q9C035 493 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 ARHGAP5Q13017 1502 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 TEX35Q5T0J7 233 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 PIP4K2BP78356 416 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 G3BP1Q13283 466 aaKnown RBP eCLIP9.74□□□□□ -0.854e-6■■■■□ 21.1
NUMB-223ENST00000556772 ABCC5O15440 1437 aa9.74□□□□□ -0.85
NUMB-223ENST00000556772 TPD52L1Q16890 204 aaPredicted RBP9.73□□□□□ -0.85
NUMB-223ENST00000556772 IGHDP01880 384 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 GNAI3P08754 354 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 NEXNQ0ZGT2 675 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 SPC24Q8NBT2 197 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 FOSBP53539 338 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 CNTROBQ8N137 903 aa9.73□□□□□ -0.85
NUMB-223ENST00000556772 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
NUMB-223ENST00000556772 SURF6O75683 361 aaKnown RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
NUMB-223ENST00000556772 A0A0U1RQG5 324 aaPredicted RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 CPLX1O14810 134 aa9.72□□□□□ -0.85
NUMB-223ENST00000556772 TNPO1Q92973 898 aaKnown RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 CPLX2Q6PUV4 134 aaKnown RBP9.72□□□□□ -0.85
NUMB-223ENST00000556772 MNS1Q8NEH6 495 aa9.72□□□□□ -0.85
NUMB-223ENST00000556772 ARGLU1Q9NWB6 273 aaPredicted RBP9.71□□□□□ -0.85
NUMB-223ENST00000556772 TPM1P09493 284 aa9.71□□□□□ -0.85
NUMB-223ENST00000556772 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.85
NUMB-223ENST00000556772 TBC1D32Q96NH3 1257 aa9.71□□□□□ -0.85
NUMB-223ENST00000556772 GNAI2P04899 355 aa9.71□□□□□ -0.86
NUMB-223ENST00000556772 SSH1Q8WYL5 1049 aa9.71□□□□□ -0.86
NUMB-223ENST00000556772 SYCE3A1L190 88 aa9.71□□□□□ -0.86
NUMB-223ENST00000556772 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
NUMB-223ENST00000556772 PSMA5P28066 241 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 SLC4A2P04920 1241 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
NUMB-223ENST00000556772 CLASRPQ8N2M8 674 aaKnown RBP9.7□□□□□ -0.86
NUMB-223ENST00000556772 SDF4Q9BRK5 362 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 PDCP20941 246 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 C8orf34Q49A92 452 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 DDX58O95786 925 aaKnown RBP9.7□□□□□ -0.86
NUMB-223ENST00000556772 POGZQ7Z3K3 1410 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
NUMB-223ENST00000556772 CCDC192P0DO97 292 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 SSFA2P28290 1259 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 NAT10Q9H0A0 1025 aaKnown RBP9.69□□□□□ -0.86
NUMB-223ENST00000556772 TRIM29Q14134 588 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
NUMB-223ENST00000556772 PRAM1Q96QH2 718 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 LRRCC1Q9C099 1032 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 ATF3P18847 181 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
NUMB-223ENST00000556772 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
NUMB-223ENST00000556772 UBE2Q2Q8WVN8 375 aa9.68□□□□□ -0.86
NUMB-223ENST00000556772 XRCC6P12956 609 aaKnown RBP eCLIP9.68□□□□□ -0.86
NUMB-223ENST00000556772 FSD1Q9BTV5 496 aa9.68□□□□□ -0.86
NUMB-223ENST00000556772 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
NUMB-223ENST00000556772 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
NUMB-223ENST00000556772 KINO60870 393 aaKnown RBP9.67□□□□□ -0.86
NUMB-223ENST00000556772 RPAP2Q8IXW5 612 aaPredicted RBP9.67□□□□□ -0.86
NUMB-223ENST00000556772 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 CAMSAP2Q08AD1 1489 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
NUMB-223ENST00000556772 PDCL3Q9H2J4 239 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
NUMB-223ENST00000556772 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 CCDC66A2RUB6 948 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 FCHSD2O94868 740 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 TRIM27P14373 513 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 CLCN1P35523 988 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 CCDC112Q8NEF3 446 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 DMRT2Q9Y5R5 561 aa9.67□□□□□ -0.86
NUMB-223ENST00000556772 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 TRDNQ13061 729 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 TNMDQ9H2S6 317 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 APPP05067 770 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 PROSER2Q86WR7 435 aaPredicted RBP9.66□□□□□ -0.86
NUMB-223ENST00000556772 AEBP1Q8IUX7 1158 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 PANK2Q9BZ23 570 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 KRT85P78386 507 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 CCDC70Q6NSX1 233 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 FMNL2Q96PY5 1086 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
NUMB-223ENST00000556772 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
NUMB-223ENST00000556772 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
NUMB-223ENST00000556772 SMC2O95347 1197 aa9.65□□□□□ -0.86
NUMB-223ENST00000556772 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 THUMPD2Q9BTF0 503 aaKnown RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
NUMB-223ENST00000556772 MAP4K4O95819 1239 aaPredicted RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 SETQ01105 290 aaPredicted RBP9.65□□□□□ -0.86
NUMB-223ENST00000556772 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.86
NUMB-223ENST00000556772 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
NUMB-223ENST00000556772 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms