RNA–Protein interactions for RNA: ENST00000556641.5

CCNK-207, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-207ENST00000556641 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
CCNK-207ENST00000556641 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
CCNK-207ENST00000556641 PSME1Q06323 249 aa14.18□□□□□ -0.14
CCNK-207ENST00000556641 MEX3CQ5U5Q3 659 aaKnown RBP14.18□□□□□ -0.14
CCNK-207ENST00000556641 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
CCNK-207ENST00000556641 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
CCNK-207ENST00000556641 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
CCNK-207ENST00000556641 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
CCNK-207ENST00000556641 TULP4Q9NRJ4 1543 aa14.17□□□□□ -0.14
CCNK-207ENST00000556641 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
CCNK-207ENST00000556641 EVC2Q86UK5 1308 aa14.16□□□□□ -0.14
CCNK-207ENST00000556641 GABBR2O75899 941 aa14.16□□□□□ -0.14
CCNK-207ENST00000556641 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
CCNK-207ENST00000556641 KIF1AQ12756 1690 aa14.16□□□□□ -0.14
CCNK-207ENST00000556641 RGPD8O14715 1765 aaPredicted RBP14.16□□□□□ -0.14
CCNK-207ENST00000556641 QRICH2Q9H0J4 1663 aa14.15□□□□□ -0.14
CCNK-207ENST00000556641 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
CCNK-207ENST00000556641 PNPLA6Q8IY17 1366 aa14.14□□□□□ -0.15
CCNK-207ENST00000556641 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
CCNK-207ENST00000556641 PXDNQ92626 1479 aa14.13□□□□□ -0.15
CCNK-207ENST00000556641 USP32Q8NFA0 1604 aa14.13□□□□□ -0.15
CCNK-207ENST00000556641 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
CCNK-207ENST00000556641 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
CCNK-207ENST00000556641 ATP7BP35670 1465 aa14.12□□□□□ -0.15
CCNK-207ENST00000556641 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
CCNK-207ENST00000556641 SPATA31A3Q5VYP0 1347 aa14.12□□□□□ -0.15
CCNK-207ENST00000556641 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
CCNK-207ENST00000556641 ST20-MTHFSA0A0A6YYL1 179 aa14.1□□□□□ -0.15
CCNK-207ENST00000556641 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
CCNK-207ENST00000556641 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
CCNK-207ENST00000556641 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
CCNK-207ENST00000556641 ACEP12821 1306 aa14.1□□□□□ -0.15
CCNK-207ENST00000556641 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 USP47Q96K76 1375 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
CCNK-207ENST00000556641 LRP6O75581 1613 aa14.08□□□□□ -0.15
CCNK-207ENST00000556641 TNS3Q68CZ2 1445 aa14.08□□□□□ -0.15
CCNK-207ENST00000556641 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
CCNK-207ENST00000556641 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
CCNK-207ENST00000556641 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
CCNK-207ENST00000556641 ATAD2Q6PL18 1390 aa14.07□□□□□ -0.16
CCNK-207ENST00000556641 NGLY1Q96IV0 654 aa14.06□□□□□ -0.16
CCNK-207ENST00000556641 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
CCNK-207ENST00000556641 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
CCNK-207ENST00000556641 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
CCNK-207ENST00000556641 CLCN6P51797 869 aa14.04□□□□□ -0.16
CCNK-207ENST00000556641 TMF1P82094 1093 aa14.04□□□□□ -0.16
CCNK-207ENST00000556641 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
CCNK-207ENST00000556641 TESK2Q96S53 571 aa14.04□□□□□ -0.16
CCNK-207ENST00000556641 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
CCNK-207ENST00000556641 AFF2P51816 1311 aa14.04□□□□□ -0.16
CCNK-207ENST00000556641 COL22A1Q8NFW1 1626 aaPredicted RBP14.04□□□□□ -0.16
CCNK-207ENST00000556641 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
CCNK-207ENST00000556641 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
CCNK-207ENST00000556641 ILDR2Q71H61 639 aa14.03□□□□□ -0.16
CCNK-207ENST00000556641 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
CCNK-207ENST00000556641 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCNK-207ENST00000556641 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
CCNK-207ENST00000556641 POTEAQ6S8J7 498 aa14.01□□□□□ -0.17
CCNK-207ENST00000556641 PUS7Q96PZ0 661 aaKnown RBP14.01□□□□□ -0.17
CCNK-207ENST00000556641 TRPM3Q9HCF6 1732 aaPredicted RBP14.01□□□□□ -0.17
CCNK-207ENST00000556641 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
CCNK-207ENST00000556641 SLC12A5Q9H2X9 1139 aa14□□□□□ -0.17
CCNK-207ENST00000556641 BRD4O60885 1362 aaPredicted RBP13.99□□□□□ -0.17
CCNK-207ENST00000556641 LHX8Q68G74 356 aa13.99□□□□□ -0.17
CCNK-207ENST00000556641 TERF2IPQ9NYB0 399 aa13.99□□□□□ -0.17
CCNK-207ENST00000556641 USP21Q9UK80 565 aa13.99□□□□□ -0.17
CCNK-207ENST00000556641 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
CCNK-207ENST00000556641 USP6P35125 1406 aa13.98□□□□□ -0.17
CCNK-207ENST00000556641 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
CCNK-207ENST00000556641 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
CCNK-207ENST00000556641 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
CCNK-207ENST00000556641 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
CCNK-207ENST00000556641 NLRP6P59044 892 aa13.97□□□□□ -0.17
CCNK-207ENST00000556641 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
CCNK-207ENST00000556641 ALS2Q96Q42 1657 aa13.97□□□□□ -0.17
CCNK-207ENST00000556641 RXRBP28702 533 aa13.96□□□□□ -0.17
CCNK-207ENST00000556641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCNK-207ENST00000556641 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
CCNK-207ENST00000556641 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
CCNK-207ENST00000556641 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
CCNK-207ENST00000556641 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
CCNK-207ENST00000556641 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
CCNK-207ENST00000556641 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
CCNK-207ENST00000556641 TTC21AQ8NDW8 1320 aa13.94□□□□□ -0.18
CCNK-207ENST00000556641 FAM83GA6ND36 823 aa13.94□□□□□ -0.18
CCNK-207ENST00000556641 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
CCNK-207ENST00000556641 TRPC5Q9UL62 973 aaPredicted RBP13.94□□□□□ -0.18
CCNK-207ENST00000556641 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
CCNK-207ENST00000556641 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
CCNK-207ENST00000556641 SSH2Q76I76 1423 aa13.92□□□□□ -0.18
CCNK-207ENST00000556641 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
CCNK-207ENST00000556641 GCP02774 474 aa13.92□□□□□ -0.18
CCNK-207ENST00000556641 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
CCNK-207ENST00000556641 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
CCNK-207ENST00000556641 A0A1W2PP64 1363 aa13.92□□□□□ -0.18
CCNK-207ENST00000556641 USP19O94966 1318 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 430.6 ms