RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 HRCP23327 699 aa11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
HNRNPC-226ENST00000556628 MYOM2P54296 1465 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 ZNF772Q68DY9 489 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 POTEAQ6S8J7 498 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 LRP6O75581 1613 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 TECPR2O15040 1411 aa11.26□□□□□ -0.61
HNRNPC-226ENST00000556628 WAPLQ7Z5K2 1190 aa11.25□□□□□ -0.61
HNRNPC-226ENST00000556628 DDX17Q92841 729 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-226ENST00000556628 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
HNRNPC-226ENST00000556628 YTHDC2Q9H6S0 1430 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-226ENST00000556628 ESCO1Q5FWF5 840 aa11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 IER5LQ5T953 404 aa11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
HNRNPC-226ENST00000556628 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-226ENST00000556628 NRXN1Q9ULB1 1477 aa11.23□□□□□ -0.61
HNRNPC-226ENST00000556628 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 PNPLA6Q8IY17 1366 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 STAC3Q96MF2 364 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
HNRNPC-226ENST00000556628 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-226ENST00000556628 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
HNRNPC-226ENST00000556628 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
HNRNPC-226ENST00000556628 POGKQ9P215 609 aa11.21□□□□□ -0.61
HNRNPC-226ENST00000556628 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.62
HNRNPC-226ENST00000556628 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
HNRNPC-226ENST00000556628 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-226ENST00000556628 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
HNRNPC-226ENST00000556628 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
HNRNPC-226ENST00000556628 AFF2P51816 1311 aa11.19□□□□□ -0.62
HNRNPC-226ENST00000556628 FOXO3O43524 673 aa11.19□□□□□ -0.62
HNRNPC-226ENST00000556628 RXRBP28702 533 aa11.19□□□□□ -0.62
HNRNPC-226ENST00000556628 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
HNRNPC-226ENST00000556628 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 SAFB2Q14151 953 aaKnown RBP eCLIP11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 NGLY1Q96IV0 654 aa11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
HNRNPC-226ENST00000556628 TRAK1Q9UPV9 953 aa11.17□□□□□ -0.62
HNRNPC-226ENST00000556628 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-226ENST00000556628 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-226ENST00000556628 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-226ENST00000556628 PXDNQ92626 1479 aa11.15□□□□□ -0.62
HNRNPC-226ENST00000556628 PSME1Q06323 249 aa11.15□□□□□ -0.62
HNRNPC-226ENST00000556628 QTRT2Q9H974 415 aaKnown RBP11.15□□□□□ -0.62
HNRNPC-226ENST00000556628 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
HNRNPC-226ENST00000556628 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
HNRNPC-226ENST00000556628 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
HNRNPC-226ENST00000556628 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
HNRNPC-226ENST00000556628 MARF1Q9Y4F3 1742 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-226ENST00000556628 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-226ENST00000556628 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 ADGRB2O60241 1585 aa11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 USP21Q9UK80 565 aa11.13□□□□□ -0.63
HNRNPC-226ENST00000556628 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
HNRNPC-226ENST00000556628 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-226ENST00000556628 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-226ENST00000556628 TRPC5Q9UL62 973 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-226ENST00000556628 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-226ENST00000556628 PLCG2P16885 1265 aa11.11□□□□□ -0.63
HNRNPC-226ENST00000556628 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
HNRNPC-226ENST00000556628 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
HNRNPC-226ENST00000556628 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
HNRNPC-226ENST00000556628 FNBP4Q8N3X1 1017 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-226ENST00000556628 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 GPRASP1Q5JY77 1395 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 PYGBP11216 843 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
HNRNPC-226ENST00000556628 SBNO1A3KN83 1393 aa11.08□□□□□ -0.64
HNRNPC-226ENST00000556628 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
HNRNPC-226ENST00000556628 RGS12O14924 1447 aa11.08□□□□□ -0.64
HNRNPC-226ENST00000556628 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-226ENST00000556628 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
HNRNPC-226ENST00000556628 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-226ENST00000556628 IRX5P78411 483 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-226ENST00000556628 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
HNRNPC-226ENST00000556628 ATRNO75882 1429 aa11.06□□□□□ -0.64
HNRNPC-226ENST00000556628 PRR36Q9H6K5 1346 aa11.05□□□□□ -0.64
HNRNPC-226ENST00000556628 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 NEUROD1Q13562 356 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms