RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
ITGA7-216ENST00000556371 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
ITGA7-216ENST00000556371 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
ITGA7-216ENST00000556371 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
ITGA7-216ENST00000556371 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
ITGA7-216ENST00000556371 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
ITGA7-216ENST00000556371 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
ITGA7-216ENST00000556371 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
ITGA7-216ENST00000556371 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
ITGA7-216ENST00000556371 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
ITGA7-216ENST00000556371 ORAI2Q96SN7 254 aa13.2□□□□□ -0.3
ITGA7-216ENST00000556371 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
ITGA7-216ENST00000556371 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
ITGA7-216ENST00000556371 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
ITGA7-216ENST00000556371 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
ITGA7-216ENST00000556371 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
ITGA7-216ENST00000556371 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
ITGA7-216ENST00000556371 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
ITGA7-216ENST00000556371 ATF3P18847 181 aa13.18□□□□□ -0.3
ITGA7-216ENST00000556371 PSME1Q06323 249 aa13.18□□□□□ -0.3
ITGA7-216ENST00000556371 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
ITGA7-216ENST00000556371 NRKQ7Z2Y5 1582 aa13.17□□□□□ -0.3
ITGA7-216ENST00000556371 APAF1O14727 1248 aa13.17□□□□□ -0.3
ITGA7-216ENST00000556371 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
ITGA7-216ENST00000556371 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
ITGA7-216ENST00000556371 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
ITGA7-216ENST00000556371 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
ITGA7-216ENST00000556371 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
ITGA7-216ENST00000556371 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
ITGA7-216ENST00000556371 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
ITGA7-216ENST00000556371 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
ITGA7-216ENST00000556371 NLRP6P59044 892 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
ITGA7-216ENST00000556371 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
ITGA7-216ENST00000556371 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
ITGA7-216ENST00000556371 FOXO3O43524 673 aa13.15□□□□□ -0.3
ITGA7-216ENST00000556371 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
ITGA7-216ENST00000556371 C1orf167Q5SNV9 1468 aa13.15□□□□□ -0.3
ITGA7-216ENST00000556371 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
ITGA7-216ENST00000556371 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
ITGA7-216ENST00000556371 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
ITGA7-216ENST00000556371 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
ITGA7-216ENST00000556371 SOX12O15370 315 aa13.13□□□□□ -0.31
ITGA7-216ENST00000556371 IL13P35225 146 aa13.13□□□□□ -0.31
ITGA7-216ENST00000556371 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
ITGA7-216ENST00000556371 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
ITGA7-216ENST00000556371 DCCP43146 1447 aa13.13□□□□□ -0.31
ITGA7-216ENST00000556371 MSH6P52701 1360 aa13.12□□□□□ -0.31
ITGA7-216ENST00000556371 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
ITGA7-216ENST00000556371 TCP11L2Q8N4U5 519 aa13.12□□□□□ -0.31
ITGA7-216ENST00000556371 LRRC7Q96NW7 1537 aa13.12□□□□□ -0.31
ITGA7-216ENST00000556371 MST1RQ04912 1400 aa13.12□□□□□ -0.31
ITGA7-216ENST00000556371 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
ITGA7-216ENST00000556371 XPCQ01831 940 aaPredicted RBP13.11□□□□□ -0.31
ITGA7-216ENST00000556371 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
ITGA7-216ENST00000556371 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
ITGA7-216ENST00000556371 FCHSD2O94868 740 aa13.1□□□□□ -0.31
ITGA7-216ENST00000556371 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
ITGA7-216ENST00000556371 RRP7AQ9Y3A4 280 aaKnown RBP13.1□□□□□ -0.31
ITGA7-216ENST00000556371 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
ITGA7-216ENST00000556371 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
ITGA7-216ENST00000556371 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
ITGA7-216ENST00000556371 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
ITGA7-216ENST00000556371 AMPHP49418 695 aa13.08□□□□□ -0.32
ITGA7-216ENST00000556371 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
ITGA7-216ENST00000556371 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
ITGA7-216ENST00000556371 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
ITGA7-216ENST00000556371 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
ITGA7-216ENST00000556371 NEFLP07196 543 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 HMOX1P09601 288 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 FKBP8Q14318 412 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
ITGA7-216ENST00000556371 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
ITGA7-216ENST00000556371 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
ITGA7-216ENST00000556371 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
ITGA7-216ENST00000556371 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
ITGA7-216ENST00000556371 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
ITGA7-216ENST00000556371 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
ITGA7-216ENST00000556371 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
ITGA7-216ENST00000556371 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
ITGA7-216ENST00000556371 MAPK8IP3Q9UPT6 1336 aa13.06□□□□□ -0.32
ITGA7-216ENST00000556371 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
ITGA7-216ENST00000556371 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
ITGA7-216ENST00000556371 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
ITGA7-216ENST00000556371 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
ITGA7-216ENST00000556371 HOXC9P31274 260 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 BRINP3Q76B58 766 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms