RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ABTB2Q8N961 1025 aa12.44□□□□□ -0.42
ACTN1-218ENST00000556343 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
ACTN1-218ENST00000556343 MYOM1P52179 1685 aa12.44□□□□□ -0.42
ACTN1-218ENST00000556343 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
ACTN1-218ENST00000556343 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
ACTN1-218ENST00000556343 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
ACTN1-218ENST00000556343 NME9Q86XW9 330 aa12.42□□□□□ -0.42
ACTN1-218ENST00000556343 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
ACTN1-218ENST00000556343 IQSEC2Q5JU85 1478 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 NLRP6P59044 892 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 CFAP53Q96M91 514 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 TOPAZ1Q8N9V7 1692 aa12.41□□□□□ -0.42
ACTN1-218ENST00000556343 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
ACTN1-218ENST00000556343 SBNO1A3KN83 1393 aa12.4□□□□□ -0.42
ACTN1-218ENST00000556343 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
ACTN1-218ENST00000556343 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
ACTN1-218ENST00000556343 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-218ENST00000556343 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
ACTN1-218ENST00000556343 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
ACTN1-218ENST00000556343 USP31Q70CQ4 1352 aa12.39□□□□□ -0.43
ACTN1-218ENST00000556343 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-218ENST00000556343 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
ACTN1-218ENST00000556343 ARHGEF10O15013 1369 aa12.37□□□□□ -0.43
ACTN1-218ENST00000556343 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
ACTN1-218ENST00000556343 RGPD8O14715 1765 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-218ENST00000556343 AKAP12Q02952 1782 aa12.36□□□□□ -0.43
ACTN1-218ENST00000556343 PIP4K2BP78356 416 aa12.36□□□□□ -0.43
ACTN1-218ENST00000556343 SOS2Q07890 1332 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-218ENST00000556343 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 MTHFSP49914 203 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 NUDCQ9Y266 331 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
ACTN1-218ENST00000556343 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
ACTN1-218ENST00000556343 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
ACTN1-218ENST00000556343 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
ACTN1-218ENST00000556343 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-218ENST00000556343 AMPHP49418 695 aa12.33□□□□□ -0.44
ACTN1-218ENST00000556343 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-218ENST00000556343 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
ACTN1-218ENST00000556343 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
ACTN1-218ENST00000556343 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
ACTN1-218ENST00000556343 POLKQ9UBT6 870 aa12.32□□□□□ -0.44
ACTN1-218ENST00000556343 SOX12O15370 315 aa12.31□□□□□ -0.44
ACTN1-218ENST00000556343 GCP02774 474 aa12.31□□□□□ -0.44
ACTN1-218ENST00000556343 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
ACTN1-218ENST00000556343 PXDNQ92626 1479 aa12.3□□□□□ -0.44
ACTN1-218ENST00000556343 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
ACTN1-218ENST00000556343 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
ACTN1-218ENST00000556343 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
ACTN1-218ENST00000556343 DIAPH1O60610 1272 aaKnown RBP12.29□□□□□ -0.44
ACTN1-218ENST00000556343 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
ACTN1-218ENST00000556343 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
ACTN1-218ENST00000556343 NRKQ7Z2Y5 1582 aa12.29□□□□□ -0.44
ACTN1-218ENST00000556343 USP19O94966 1318 aa12.29□□□□□ -0.44
ACTN1-218ENST00000556343 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
ACTN1-218ENST00000556343 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
ACTN1-218ENST00000556343 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
ACTN1-218ENST00000556343 INSRP06213 1382 aa12.28□□□□□ -0.44
ACTN1-218ENST00000556343 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
ACTN1-218ENST00000556343 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.45
ACTN1-218ENST00000556343 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 NEFMP07197 916 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 FBLN1P23142 703 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 IP6K1Q92551 441 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 FLT4P35916 1363 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-218ENST00000556343 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
ACTN1-218ENST00000556343 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
ACTN1-218ENST00000556343 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
ACTN1-218ENST00000556343 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-218ENST00000556343 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
ACTN1-218ENST00000556343 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-218ENST00000556343 HOXC9P31274 260 aa12.24□□□□□ -0.45
ACTN1-218ENST00000556343 ZC3H6P61129 1189 aaKnown RBP12.24□□□□□ -0.45
ACTN1-218ENST00000556343 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
ACTN1-218ENST00000556343 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
ACTN1-218ENST00000556343 CABLES1Q8TDN4 633 aa12.24□□□□□ -0.45
ACTN1-218ENST00000556343 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
ACTN1-218ENST00000556343 CDK12Q9NYV4 1490 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-218ENST00000556343 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
ACTN1-218ENST00000556343 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
ACTN1-218ENST00000556343 SLIT3O75094 1523 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 CPDO75976 1380 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 JCADQ9P266 1359 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 IL13P35225 146 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
ACTN1-218ENST00000556343 FCHSD2O94868 740 aa12.21□□□□□ -0.45
ACTN1-218ENST00000556343 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
ACTN1-218ENST00000556343 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
ACTN1-218ENST00000556343 EVA1CP58658 441 aa12.2□□□□□ -0.46
ACTN1-218ENST00000556343 NGEFQ8N5V2 710 aa12.2□□□□□ -0.46
ACTN1-218ENST00000556343 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms