RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KNDC1Q76NI1 1749 aa9.86□□□□□ -0.83
PSEN1-216ENST00000556066 C8orf37Q96NL8 207 aa9.86□□□□□ -0.83
PSEN1-216ENST00000556066 LRPPRCP42704 1394 aaKnown RBP9.86□□□□□ -0.83
PSEN1-216ENST00000556066 LAMC1P11047 1609 aa9.85□□□□□ -0.83
PSEN1-216ENST00000556066 RGS12O14924 1447 aa9.85□□□□□ -0.83
PSEN1-216ENST00000556066 QTRT2Q9H974 415 aaKnown RBP9.85□□□□□ -0.83
PSEN1-216ENST00000556066 YTHDC2Q9H6S0 1430 aaKnown RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 RGPD8O14715 1765 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 RBM6P78332 1123 aaKnown RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
PSEN1-216ENST00000556066 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-216ENST00000556066 ABCC11Q96J66 1382 aa9.84□□□□□ -0.83
PSEN1-216ENST00000556066 PLEKHH1Q9ULM0 1364 aa9.84□□□□□ -0.83
PSEN1-216ENST00000556066 SOS2Q07890 1332 aaPredicted RBP9.83□□□□□ -0.84
PSEN1-216ENST00000556066 TECPR2O15040 1411 aa9.83□□□□□ -0.84
PSEN1-216ENST00000556066 FMN2Q9NZ56 1722 aa9.83□□□□□ -0.84
PSEN1-216ENST00000556066 FOXO3O43524 673 aa9.83□□□□□ -0.84
PSEN1-216ENST00000556066 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
PSEN1-216ENST00000556066 C14orf93Q9H972 538 aaKnown RBP9.83□□□□□ -0.84
PSEN1-216ENST00000556066 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
PSEN1-216ENST00000556066 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
PSEN1-216ENST00000556066 KDM2AQ9Y2K7 1162 aa9.82□□□□□ -0.84
PSEN1-216ENST00000556066 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
PSEN1-216ENST00000556066 MYOM2P54296 1465 aa9.82□□□□□ -0.84
PSEN1-216ENST00000556066 MIER1Q8N108 512 aa9.81□□□□□ -0.84
PSEN1-216ENST00000556066 PLCD3Q8N3E9 789 aa9.81□□□□□ -0.84
PSEN1-216ENST00000556066 FAM163AQ96GL9 167 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-216ENST00000556066 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
PSEN1-216ENST00000556066 MARF1Q9Y4F3 1742 aaKnown RBP9.8□□□□□ -0.84
PSEN1-216ENST00000556066 PRAM1Q96QH2 718 aa9.8□□□□□ -0.84
PSEN1-216ENST00000556066 POGKQ9P215 609 aa9.8□□□□□ -0.84
PSEN1-216ENST00000556066 COL22A1Q8NFW1 1626 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-216ENST00000556066 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
PSEN1-216ENST00000556066 PXDNQ92626 1479 aa9.79□□□□□ -0.84
PSEN1-216ENST00000556066 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
PSEN1-216ENST00000556066 USP21Q9UK80 565 aa9.79□□□□□ -0.84
PSEN1-216ENST00000556066 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
PSEN1-216ENST00000556066 EP400Q96L91 3159 aa9.77□□□□□ -0.85
PSEN1-216ENST00000556066 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
PSEN1-216ENST00000556066 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
PSEN1-216ENST00000556066 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.85
PSEN1-216ENST00000556066 ATAD2Q6PL18 1390 aa9.76□□□□□ -0.85
PSEN1-216ENST00000556066 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-216ENST00000556066 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
PSEN1-216ENST00000556066 FNBP4Q8N3X1 1017 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-216ENST00000556066 HIRIP3Q9BW71 556 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-216ENST00000556066 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
PSEN1-216ENST00000556066 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-216ENST00000556066 DLC1Q96QB1 1528 aa9.76□□□□□ -0.85
PSEN1-216ENST00000556066 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
PSEN1-216ENST00000556066 HRCP23327 699 aa9.75□□□□□ -0.85
PSEN1-216ENST00000556066 ATN1P54259 1190 aaPredicted RBP9.75□□□□□ -0.85
PSEN1-216ENST00000556066 PSME1Q06323 249 aa9.75□□□□□ -0.85
PSEN1-216ENST00000556066 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
PSEN1-216ENST00000556066 TRPC5Q9UL62 973 aaPredicted RBP9.75□□□□□ -0.85
PSEN1-216ENST00000556066 SPATA31A3Q5VYP0 1347 aa9.75□□□□□ -0.85
PSEN1-216ENST00000556066 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
PSEN1-216ENST00000556066 ATRNO75882 1429 aa9.74□□□□□ -0.85
PSEN1-216ENST00000556066 SEC24BO95487 1268 aa9.74□□□□□ -0.85
PSEN1-216ENST00000556066 SPOCK2Q92563 424 aa9.74□□□□□ -0.85
PSEN1-216ENST00000556066 ADGRB2O60241 1585 aa9.73□□□□□ -0.85
PSEN1-216ENST00000556066 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
PSEN1-216ENST00000556066 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
PSEN1-216ENST00000556066 ARHGEF28Q8N1W1 1705 aaKnown RBP9.73□□□□□ -0.85
PSEN1-216ENST00000556066 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
PSEN1-216ENST00000556066 STAC3Q96MF2 364 aa9.72□□□□□ -0.85
PSEN1-216ENST00000556066 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-216ENST00000556066 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
PSEN1-216ENST00000556066 BCL9LQ86UU0 1499 aa9.72□□□□□ -0.85
PSEN1-216ENST00000556066 ABCA3Q99758 1704 aa9.71□□□□□ -0.85
PSEN1-216ENST00000556066 POTEJP0CG39 1038 aa9.71□□□□□ -0.86
PSEN1-216ENST00000556066 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
PSEN1-216ENST00000556066 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-216ENST00000556066 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.7□□□□□ -0.86
PSEN1-216ENST00000556066 WASLO00401 505 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-216ENST00000556066 TIE1P35590 1138 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 SBNO1A3KN83 1393 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 EIF3AQ14152 1382 aaKnown RBP9.7□□□□□ -0.86
PSEN1-216ENST00000556066 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 TULP4Q9NRJ4 1543 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 PLCH1Q4KWH8 1693 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 ITSN1Q15811 1721 aa9.7□□□□□ -0.86
PSEN1-216ENST00000556066 UNC5CLQ8IV45 518 aa9.69□□□□□ -0.86
PSEN1-216ENST00000556066 NGDNQ8NEJ9 315 aaKnown RBP9.69□□□□□ -0.86
PSEN1-216ENST00000556066 GJD4Q96KN9 370 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-216ENST00000556066 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
PSEN1-216ENST00000556066 TRPM3Q9HCF6 1732 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-216ENST00000556066 CCDC9Q9Y3X0 531 aaKnown RBP9.69□□□□□ -0.86
PSEN1-216ENST00000556066 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
PSEN1-216ENST00000556066 NWD2Q9ULI1 1742 aa9.68□□□□□ -0.86
PSEN1-216ENST00000556066 KIAA1210Q9ULL0 1709 aa9.68□□□□□ -0.86
PSEN1-216ENST00000556066 SLIT2O94813 1529 aa9.68□□□□□ -0.86
PSEN1-216ENST00000556066 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-216ENST00000556066 ALS2Q96Q42 1657 aa9.67□□□□□ -0.86
PSEN1-216ENST00000556066 GLI3P10071 1580 aa9.67□□□□□ -0.86
PSEN1-216ENST00000556066 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms