RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 DAPK1P53355 1430 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 NPATQ14207 1427 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 A2MP01023 1474 aa11.38□□□□□ -0.59
SUPT16H-204ENST00000555943 ABCC5O15440 1437 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 SOCS7O14512 581 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
SUPT16H-204ENST00000555943 KCNK17Q96T54 332 aa11.36□□□□□ -0.59
SUPT16H-204ENST00000555943 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
SUPT16H-204ENST00000555943 ARHGEF5Q12774 1597 aa11.36□□□□□ -0.59
SUPT16H-204ENST00000555943 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
SUPT16H-204ENST00000555943 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
SUPT16H-204ENST00000555943 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-204ENST00000555943 EMP3P54852 163 aa11.35□□□□□ -0.59
SUPT16H-204ENST00000555943 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
SUPT16H-204ENST00000555943 FAM163AQ96GL9 167 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-204ENST00000555943 ZMYM3Q14202 1370 aa11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 OATP04181 439 aa11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 FAM135AQ9P2D6 1515 aa11.34□□□□□ -0.59
SUPT16H-204ENST00000555943 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SUPT16H-204ENST00000555943 PTPRTO14522 1441 aa11.33□□□□□ -0.6
SUPT16H-204ENST00000555943 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-204ENST00000555943 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
SUPT16H-204ENST00000555943 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
SUPT16H-204ENST00000555943 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
SUPT16H-204ENST00000555943 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-204ENST00000555943 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
SUPT16H-204ENST00000555943 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
SUPT16H-204ENST00000555943 DHX29Q7Z478 1369 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-204ENST00000555943 PSEN2P49810 448 aa11.31□□□□□ -0.6
SUPT16H-204ENST00000555943 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 MDM2Q00987 491 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 GGT6Q6P531 493 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 NLRP7Q8WX94 980 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
SUPT16H-204ENST00000555943 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 IL27Q8NEV9 243 aa11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
SUPT16H-204ENST00000555943 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 MAST1Q9Y2H9 1570 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 PLA2R1Q13018 1463 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 CLCN1P35523 988 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
SUPT16H-204ENST00000555943 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.6
SUPT16H-204ENST00000555943 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.6
SUPT16H-204ENST00000555943 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
SUPT16H-204ENST00000555943 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
SUPT16H-204ENST00000555943 EYA1Q99502 592 aa11.27□□□□□ -0.61
SUPT16H-204ENST00000555943 GPCPD1Q9NPB8 672 aa11.27□□□□□ -0.61
SUPT16H-204ENST00000555943 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-204ENST00000555943 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 NUDT18Q6ZVK8 323 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 LTBP4Q8N2S1 1624 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
SUPT16H-204ENST00000555943 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 MS4A1P11836 297 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 TATDN2Q93075 761 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 ANKRD50Q9ULJ7 1429 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
SUPT16H-204ENST00000555943 KIF3BO15066 747 aa11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 PBX2P40425 430 aa11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 NAIPQ13075 1403 aa11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 PZPP20742 1482 aa11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
SUPT16H-204ENST00000555943 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
SUPT16H-204ENST00000555943 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
SUPT16H-204ENST00000555943 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
SUPT16H-204ENST00000555943 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
SUPT16H-204ENST00000555943 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
SUPT16H-204ENST00000555943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms