RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
ATXN3-233ENST00000555816 UNC93B1Q9H1C4 597 aa9.93□□□□□ -0.82
ATXN3-233ENST00000555816 VARSP26640 1264 aaKnown RBP9.92□□□□□ -0.82
ATXN3-233ENST00000555816 SH3BP2P78314 561 aa9.92□□□□□ -0.82
ATXN3-233ENST00000555816 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
ATXN3-233ENST00000555816 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
ATXN3-233ENST00000555816 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
ATXN3-233ENST00000555816 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
ATXN3-233ENST00000555816 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
ATXN3-233ENST00000555816 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-233ENST00000555816 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
ATXN3-233ENST00000555816 BAP1Q92560 729 aa9.89□□□□□ -0.83
ATXN3-233ENST00000555816 PDE4DQ08499 809 aa9.88□□□□□ -0.83
ATXN3-233ENST00000555816 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
ATXN3-233ENST00000555816 HRCP23327 699 aa9.87□□□□□ -0.83
ATXN3-233ENST00000555816 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
ATXN3-233ENST00000555816 WFS1O76024 890 aa9.86□□□□□ -0.83
ATXN3-233ENST00000555816 CTHP32929 405 aa9.85□□□□□ -0.83
ATXN3-233ENST00000555816 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
ATXN3-233ENST00000555816 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-233ENST00000555816 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-233ENST00000555816 CFAP99D6REC4 459 aa9.83□□□□□ -0.84
ATXN3-233ENST00000555816 F12P00748 615 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-233ENST00000555816 ARMC2Q8NEN0 867 aa9.83□□□□□ -0.84
ATXN3-233ENST00000555816 FAM174AQ8TBP5 190 aa9.83□□□□□ -0.84
ATXN3-233ENST00000555816 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
ATXN3-233ENST00000555816 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
ATXN3-233ENST00000555816 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
ATXN3-233ENST00000555816 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
ATXN3-233ENST00000555816 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-233ENST00000555816 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-233ENST00000555816 TERTO14746 1132 aaKnown RBP9.81□□□□□ -0.84
ATXN3-233ENST00000555816 LILRB3O75022 631 aa9.81□□□□□ -0.84
ATXN3-233ENST00000555816 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-233ENST00000555816 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-233ENST00000555816 NPAS3Q8IXF0 933 aa9.8□□□□□ -0.84
ATXN3-233ENST00000555816 CDK15Q96Q40 435 aa9.8□□□□□ -0.84
ATXN3-233ENST00000555816 WIPF1O43516 503 aa9.79□□□□□ -0.84
ATXN3-233ENST00000555816 BPHLQ86WA6 291 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-233ENST00000555816 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
ATXN3-233ENST00000555816 NNTQ13423 1086 aa9.78□□□□□ -0.84
ATXN3-233ENST00000555816 HELBQ8NG08 1087 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-233ENST00000555816 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
ATXN3-233ENST00000555816 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
ATXN3-233ENST00000555816 ADH1CP00326 375 aa9.77□□□□□ -0.85
ATXN3-233ENST00000555816 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
ATXN3-233ENST00000555816 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
ATXN3-233ENST00000555816 INSM1Q01101 510 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-233ENST00000555816 NR5A1Q13285 461 aa9.76□□□□□ -0.85
ATXN3-233ENST00000555816 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
ATXN3-233ENST00000555816 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
ATXN3-233ENST00000555816 TLL2Q9Y6L7 1015 aa9.76□□□□□ -0.85
ATXN3-233ENST00000555816 CLK2P49760 499 aaKnown RBP9.75□□□□□ -0.85
ATXN3-233ENST00000555816 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
ATXN3-233ENST00000555816 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
ATXN3-233ENST00000555816 GPKOWQ92917 476 aaPredicted RBP eCLIP9.75□□□□□ -0.85
ATXN3-233ENST00000555816 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
ATXN3-233ENST00000555816 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
ATXN3-233ENST00000555816 QPCTQ16769 361 aa9.74□□□□□ -0.85
ATXN3-233ENST00000555816 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-233ENST00000555816 SCARF1Q14162 830 aa9.73□□□□□ -0.85
ATXN3-233ENST00000555816 AGERQ15109 404 aa9.73□□□□□ -0.85
ATXN3-233ENST00000555816 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
ATXN3-233ENST00000555816 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-233ENST00000555816 TSC1Q92574 1164 aa9.72□□□□□ -0.85
ATXN3-233ENST00000555816 BMP1P13497 986 aa9.71□□□□□ -0.86
ATXN3-233ENST00000555816 TIMP2P16035 220 aa9.71□□□□□ -0.86
ATXN3-233ENST00000555816 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
ATXN3-233ENST00000555816 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
ATXN3-233ENST00000555816 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
ATXN3-233ENST00000555816 STK17AQ9UEE5 414 aa9.71□□□□□ -0.86
ATXN3-233ENST00000555816 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-233ENST00000555816 SH3RF1Q7Z6J0 888 aa9.7□□□□□ -0.86
ATXN3-233ENST00000555816 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
ATXN3-233ENST00000555816 GRM5P41594 1212 aa9.69□□□□□ -0.86
ATXN3-233ENST00000555816 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
ATXN3-233ENST00000555816 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
ATXN3-233ENST00000555816 C1QTNF2Q9BXJ5 285 aa9.69□□□□□ -0.86
ATXN3-233ENST00000555816 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
ATXN3-233ENST00000555816 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
ATXN3-233ENST00000555816 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
ATXN3-233ENST00000555816 IRF7Q92985 503 aa9.67□□□□□ -0.86
ATXN3-233ENST00000555816 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
ATXN3-233ENST00000555816 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
ATXN3-233ENST00000555816 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-233ENST00000555816 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
ATXN3-233ENST00000555816 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
ATXN3-233ENST00000555816 BCANQ96GW7 911 aa9.65□□□□□ -0.86
ATXN3-233ENST00000555816 CDV3Q9UKY7 258 aaKnown RBP9.65□□□□□ -0.86
ATXN3-233ENST00000555816 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
ATXN3-233ENST00000555816 ZC3H4Q9UPT8 1303 aaKnown RBP9.64□□□□□ -0.87
ATXN3-233ENST00000555816 H3BM21 787 aa9.64□□□□□ -0.87
ATXN3-233ENST00000555816 UPP2O95045 317 aa9.64□□□□□ -0.87
ATXN3-233ENST00000555816 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
ATXN3-233ENST00000555816 NR3C2P08235 984 aa9.63□□□□□ -0.87
ATXN3-233ENST00000555816 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
ATXN3-233ENST00000555816 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
ATXN3-233ENST00000555816 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
ATXN3-233ENST00000555816 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-233ENST00000555816 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms