RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ABCC1P33527 1531 aa22.14■■□□□ 1.14
RCCD1-204ENST00000555737 NUCB1Q02818 461 aa22.14■■□□□ 1.13
RCCD1-204ENST00000555737 ABCA6Q8N139 1617 aa22.14■■□□□ 1.13
RCCD1-204ENST00000555737 FANCAO15360 1455 aa22.14■■□□□ 1.13
RCCD1-204ENST00000555737 ZNF518AQ6AHZ1 1483 aa22.14■■□□□ 1.13
RCCD1-204ENST00000555737 TBC1D9Q6ZT07 1266 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 GAS2L2Q8NHY3 880 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 CHAMP1Q96JM3 812 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 FYB1O15117 783 aa22.13■■□□□ 1.13
RCCD1-204ENST00000555737 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
RCCD1-204ENST00000555737 PHACTR3Q96KR7 559 aa22.12■■□□□ 1.13
RCCD1-204ENST00000555737 PLEKHF1Q96S99 279 aa22.12■■□□□ 1.13
RCCD1-204ENST00000555737 CLCN1P35523 988 aa22.11■■□□□ 1.13
RCCD1-204ENST00000555737 C16orf71Q8IYS4 520 aaPredicted RBP22.11■■□□□ 1.13
RCCD1-204ENST00000555737 CABP1Q9NZU7 370 aa22.11■■□□□ 1.13
RCCD1-204ENST00000555737 CD109Q6YHK3 1445 aa22.11■■□□□ 1.13
RCCD1-204ENST00000555737 FOXD4L6Q3SYB3 417 aaPredicted RBP22.11■■□□□ 1.13
RCCD1-204ENST00000555737 FOXD4L3Q6VB84 417 aaPredicted RBP22.11■■□□□ 1.13
RCCD1-204ENST00000555737 MCTP1Q6DN14 999 aa22.11■■□□□ 1.13
RCCD1-204ENST00000555737 SOX12O15370 315 aa22.1■■□□□ 1.13
RCCD1-204ENST00000555737 ADGRL1O94910 1474 aa22.1■■□□□ 1.13
RCCD1-204ENST00000555737 A0A1W2PP64 1363 aa22.1■■□□□ 1.13
RCCD1-204ENST00000555737 KIF16BQ96L93 1317 aa22.1■■□□□ 1.13
RCCD1-204ENST00000555737 NOL8Q76FK4 1167 aaKnown RBP22.1■■□□□ 1.13
RCCD1-204ENST00000555737 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
RCCD1-204ENST00000555737 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
RCCD1-204ENST00000555737 RTEL1-TNFRSF6BF6WH68 1400 aa22.08■■□□□ 1.13
RCCD1-204ENST00000555737 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
RCCD1-204ENST00000555737 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.12
RCCD1-204ENST00000555737 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.12
RCCD1-204ENST00000555737 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
RCCD1-204ENST00000555737 MAP3K4Q9Y6R4 1608 aa22.07■■□□□ 1.12
RCCD1-204ENST00000555737 K7ELQ4 463 aaPredicted RBP22.07■■□□□ 1.12
RCCD1-204ENST00000555737 TERF2IPQ9NYB0 399 aa22.07■■□□□ 1.12
RCCD1-204ENST00000555737 GOLGA6L22H0YM25 854 aa22.06■■□□□ 1.12
RCCD1-204ENST00000555737 VGFO15240 615 aaPredicted RBP22.06■■□□□ 1.12
RCCD1-204ENST00000555737 CAVIN1Q6NZI2 390 aaKnown RBP22.06■■□□□ 1.12
RCCD1-204ENST00000555737 ANP32BQ92688 251 aaKnown RBP22.06■■□□□ 1.12
RCCD1-204ENST00000555737 SMARCA5O60264 1052 aaPredicted RBP22.05■■□□□ 1.12
RCCD1-204ENST00000555737 PKP1Q13835 747 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 ATP7AQ04656 1500 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 ANKRD36BQ8N2N9 1353 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
RCCD1-204ENST00000555737 RBM25P49756 843 aaKnown RBP22.05■■□□□ 1.12
RCCD1-204ENST00000555737 OTUD7AQ8TE49 926 aaPredicted RBP22.05■■□□□ 1.12
RCCD1-204ENST00000555737 KIF2CQ99661 725 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 ZRANB1Q9UGI0 708 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 EMILIN1Q9Y6C2 1016 aa22.05■■□□□ 1.12
RCCD1-204ENST00000555737 KRT24Q2M2I5 525 aa22.04■■□□□ 1.12
RCCD1-204ENST00000555737 IDI1Q13907 227 aa22.04■■□□□ 1.12
RCCD1-204ENST00000555737 CHD1O14646 1710 aa22.04■■□□□ 1.12
RCCD1-204ENST00000555737 RAB3GAP1Q15042 981 aa22.03■■□□□ 1.12
RCCD1-204ENST00000555737 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
RCCD1-204ENST00000555737 ZBTB7BO15156 539 aaPredicted RBP22.03■■□□□ 1.12
RCCD1-204ENST00000555737 RBM10P98175 930 aaKnown RBP22.02■■□□□ 1.12
RCCD1-204ENST00000555737 BMP2KLQ5H9B9 411 aa22.02■■□□□ 1.12
RCCD1-204ENST00000555737 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
RCCD1-204ENST00000555737 MPNDQ8N594 471 aa22.02■■□□□ 1.12
RCCD1-204ENST00000555737 SHPRHQ149N8 1683 aa22.02■■□□□ 1.12
RCCD1-204ENST00000555737 VIRMAQ69YN4 1812 aaKnown RBP22.02■■□□□ 1.12
RCCD1-204ENST00000555737 WAPLQ7Z5K2 1190 aa22.01■■□□□ 1.11
RCCD1-204ENST00000555737 ZCCHC11Q5TAX3 1644 aaKnown RBP22.01■■□□□ 1.11
RCCD1-204ENST00000555737 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
RCCD1-204ENST00000555737 NUTM2FA1L443 756 aa22.01■■□□□ 1.11
RCCD1-204ENST00000555737 RRS1Q15050 365 aaKnown RBP22.01■■□□□ 1.11
RCCD1-204ENST00000555737 GLIPR1L2Q4G1C9 344 aa22.01■■□□□ 1.11
RCCD1-204ENST00000555737 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
RCCD1-204ENST00000555737 CDK19Q9BWU1 502 aa22.01■■□□□ 1.11
RCCD1-204ENST00000555737 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
RCCD1-204ENST00000555737 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
RCCD1-204ENST00000555737 VAMP4O75379 141 aa21.99■■□□□ 1.11
RCCD1-204ENST00000555737 MBIPQ9NS73 344 aa21.99■■□□□ 1.11
RCCD1-204ENST00000555737 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
RCCD1-204ENST00000555737 SBNO2Q9Y2G9 1366 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 BAG4O95429 457 aaKnown RBP21.98■■□□□ 1.11
RCCD1-204ENST00000555737 SNX21Q969T3 373 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 NPATQ14207 1427 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 PRPF40AO75400 957 aaKnown RBP21.98■■□□□ 1.11
RCCD1-204ENST00000555737 TSHZ3Q63HK5 1081 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 TET3O43151 1660 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 MYOM2P54296 1465 aa21.98■■□□□ 1.11
RCCD1-204ENST00000555737 ZGPATQ8N5A5 531 aaKnown RBP21.97■■□□□ 1.11
RCCD1-204ENST00000555737 CDC45O75419 566 aa21.97■■□□□ 1.11
RCCD1-204ENST00000555737 GSPT1P15170 499 aaKnown RBP21.97■■□□□ 1.11
RCCD1-204ENST00000555737 MSNP26038 577 aaKnown RBP21.97■■□□□ 1.11
RCCD1-204ENST00000555737 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
RCCD1-204ENST00000555737 KIAA1211Q6ZU35 1233 aa21.97■■□□□ 1.11
RCCD1-204ENST00000555737 RNF214Q8ND24 703 aa21.97■■□□□ 1.11
RCCD1-204ENST00000555737 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
RCCD1-204ENST00000555737 SLC4A10Q6U841 1118 aa21.96■■□□□ 1.11
RCCD1-204ENST00000555737 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
RCCD1-204ENST00000555737 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
RCCD1-204ENST00000555737 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
RCCD1-204ENST00000555737 GCC1Q96CN9 775 aa21.95■■□□□ 1.1
RCCD1-204ENST00000555737 SKOR2Q2VWA4 1001 aaPredicted RBP21.95■■□□□ 1.1
RCCD1-204ENST00000555737 DDIT3P35638 169 aa21.94■■□□□ 1.1
RCCD1-204ENST00000555737 FBXO31Q5XUX0 539 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms