RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
PRKCH-217ENST00000555604 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
PRKCH-217ENST00000555604 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
PRKCH-217ENST00000555604 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-217ENST00000555604 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
PRKCH-217ENST00000555604 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
PRKCH-217ENST00000555604 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-217ENST00000555604 CD163L1Q9NR16 1453 aa9.09□□□□□ -0.95
PRKCH-217ENST00000555604 LMOD2Q6P5Q4 547 aa9.09□□□□□ -0.95
PRKCH-217ENST00000555604 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
PRKCH-217ENST00000555604 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-217ENST00000555604 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-217ENST00000555604 NLRP6P59044 892 aa9.08□□□□□ -0.96
PRKCH-217ENST00000555604 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
PRKCH-217ENST00000555604 TRPM3Q9HCF6 1732 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-217ENST00000555604 MED1Q15648 1581 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-217ENST00000555604 USP19O94966 1318 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 CGNL1Q0VF96 1302 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 MEX3CQ5U5Q3 659 aaKnown RBP9.07□□□□□ -0.96
PRKCH-217ENST00000555604 POLR3GLQ9BT43 218 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 PANK3Q9H999 370 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
PRKCH-217ENST00000555604 WASHC2AQ641Q2 1341 aa9.06□□□□□ -0.96
PRKCH-217ENST00000555604 GCP02774 474 aa9.06□□□□□ -0.96
PRKCH-217ENST00000555604 COG3Q96JB2 828 aa9.06□□□□□ -0.96
PRKCH-217ENST00000555604 KNSTRNQ9Y448 316 aa9.06□□□□□ -0.96
PRKCH-217ENST00000555604 NSD2O96028 1365 aa9.06□□□□□ -0.96
PRKCH-217ENST00000555604 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
PRKCH-217ENST00000555604 CPDO75976 1380 aa9.05□□□□□ -0.96
PRKCH-217ENST00000555604 NUTM2BA6NNL0 878 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 NUTM2EB1AL46 878 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 FYB1O15117 783 aa9.05□□□□□ -0.96
PRKCH-217ENST00000555604 ZNF772Q68DY9 489 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-217ENST00000555604 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
PRKCH-217ENST00000555604 NRKQ7Z2Y5 1582 aa9.04□□□□□ -0.96
PRKCH-217ENST00000555604 NPC1L1Q9UHC9 1359 aa9.04□□□□□ -0.96
PRKCH-217ENST00000555604 NSD3Q9BZ95 1437 aa9.04□□□□□ -0.96
PRKCH-217ENST00000555604 NME9Q86XW9 330 aa9.03□□□□□ -0.96
PRKCH-217ENST00000555604 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
PRKCH-217ENST00000555604 PHF23Q9BUL5 403 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-217ENST00000555604 SLIT3O75094 1523 aa9.03□□□□□ -0.96
PRKCH-217ENST00000555604 MYOM1P52179 1685 aa9.03□□□□□ -0.96
PRKCH-217ENST00000555604 KIF24Q5T7B8 1368 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 PER1O15534 1290 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-217ENST00000555604 ADAMTS2O95450 1211 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 CABLES1Q8TDN4 633 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 OVOS2A0A0J9YW53 1432 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 OVOS2Q6IE36 1432 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 LRP6O75581 1613 aa9.02□□□□□ -0.97
PRKCH-217ENST00000555604 AATKQ6ZMQ8 1374 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 PIK3C2AO00443 1686 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 USP54Q70EL1 1684 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-217ENST00000555604 NUTM2GQ5VZR2 741 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 ARHGEF25Q86VW2 580 aa9.01□□□□□ -0.97
PRKCH-217ENST00000555604 ABCC6O95255 1503 aa9□□□□□ -0.97
PRKCH-217ENST00000555604 KIAA0232Q92628 1395 aa9□□□□□ -0.97
PRKCH-217ENST00000555604 AMER1Q5JTC6 1135 aaPredicted RBP9□□□□□ -0.97
PRKCH-217ENST00000555604 UNC5CLQ8IV45 518 aa9□□□□□ -0.97
PRKCH-217ENST00000555604 USP21Q9UK80 565 aa9□□□□□ -0.97
PRKCH-217ENST00000555604 TRPC5Q9UL62 973 aaPredicted RBP9□□□□□ -0.97
PRKCH-217ENST00000555604 SLIT2O94813 1529 aa9□□□□□ -0.97
PRKCH-217ENST00000555604 ZC3H6P61129 1189 aaKnown RBP8.99□□□□□ -0.97
PRKCH-217ENST00000555604 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
PRKCH-217ENST00000555604 AFF2P51816 1311 aa8.99□□□□□ -0.97
PRKCH-217ENST00000555604 RTL1A6NKG5 1358 aa8.99□□□□□ -0.97
PRKCH-217ENST00000555604 CRYBG1Q9Y4K1 1723 aa8.98□□□□□ -0.97
PRKCH-217ENST00000555604 EVA1CP58658 441 aa8.98□□□□□ -0.97
PRKCH-217ENST00000555604 VPS72Q15906 364 aa8.98□□□□□ -0.97
PRKCH-217ENST00000555604 MORC1Q86VD1 984 aa8.98□□□□□ -0.97
PRKCH-217ENST00000555604 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
PRKCH-217ENST00000555604 COL14A1Q05707 1796 aaKnown RBP8.98□□□□□ -0.97
PRKCH-217ENST00000555604 PHRF1Q9P1Y6 1649 aaKnown RBP8.98□□□□□ -0.97
PRKCH-217ENST00000555604 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-217ENST00000555604 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
PRKCH-217ENST00000555604 BCL9LQ86UU0 1499 aa8.97□□□□□ -0.97
PRKCH-217ENST00000555604 NFAT5O94916 1531 aa8.97□□□□□ -0.97
PRKCH-217ENST00000555604 IP6K1Q92551 441 aa8.97□□□□□ -0.97
PRKCH-217ENST00000555604 QTRT2Q9H974 415 aaKnown RBP8.97□□□□□ -0.97
PRKCH-217ENST00000555604 BTG4Q9NY30 223 aa8.97□□□□□ -0.97
PRKCH-217ENST00000555604 THRAP3Q9Y2W1 955 aaKnown RBP8.97□□□□□ -0.97
PRKCH-217ENST00000555604 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
PRKCH-217ENST00000555604 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
PRKCH-217ENST00000555604 RXRBP28702 533 aa8.96□□□□□ -0.98
PRKCH-217ENST00000555604 AMPHP49418 695 aa8.96□□□□□ -0.98
PRKCH-217ENST00000555604 RBM6P78332 1123 aaKnown RBP8.96□□□□□ -0.98
PRKCH-217ENST00000555604 NWD2Q9ULI1 1742 aa8.96□□□□□ -0.98
PRKCH-217ENST00000555604 DDX10Q13206 875 aaKnown RBP8.95□□□□□ -0.98
PRKCH-217ENST00000555604 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
PRKCH-217ENST00000555604 GJD4Q96KN9 370 aaPredicted RBP8.95□□□□□ -0.98
PRKCH-217ENST00000555604 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
PRKCH-217ENST00000555604 MAP3K19Q56UN5 1328 aa8.95□□□□□ -0.98
PRKCH-217ENST00000555604 FLT4P35916 1363 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms