RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
SNX6-204ENST00000555541 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
SNX6-204ENST00000555541 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
SNX6-204ENST00000555541 ADH1CP00326 375 aa10.5□□□□□ -0.73
SNX6-204ENST00000555541 WDR4P57081 412 aaKnown RBP10.5□□□□□ -0.73
SNX6-204ENST00000555541 DESI1Q6ICB0 168 aa10.5□□□□□ -0.73
SNX6-204ENST00000555541 SPIRE2Q8WWL2 714 aa10.5□□□□□ -0.73
SNX6-204ENST00000555541 CDK15Q96Q40 435 aa10.49□□□□□ -0.73
SNX6-204ENST00000555541 NDUFV2P19404 249 aa10.48□□□□□ -0.73
SNX6-204ENST00000555541 SCARF1Q14162 830 aa10.48□□□□□ -0.73
SNX6-204ENST00000555541 PRR7Q8TB68 274 aa10.48□□□□□ -0.73
SNX6-204ENST00000555541 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
SNX6-204ENST00000555541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
SNX6-204ENST00000555541 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
SNX6-204ENST00000555541 PPFIA3O75145 1194 aa10.44□□□□□ -0.74
SNX6-204ENST00000555541 NR3C2P08235 984 aa10.44□□□□□ -0.74
SNX6-204ENST00000555541 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
SNX6-204ENST00000555541 KRT76Q01546 638 aa10.43□□□□□ -0.74
SNX6-204ENST00000555541 LYPD8Q6UX82 237 aa10.43□□□□□ -0.74
SNX6-204ENST00000555541 ITPKCQ96DU7 683 aa10.43□□□□□ -0.74
SNX6-204ENST00000555541 GRM5P41594 1212 aa10.42□□□□□ -0.74
SNX6-204ENST00000555541 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
SNX6-204ENST00000555541 KCTD17Q8N5Z5 321 aa10.42□□□□□ -0.74
SNX6-204ENST00000555541 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
SNX6-204ENST00000555541 SPDYE5A6NIY4 337 aa10.41□□□□□ -0.74
SNX6-204ENST00000555541 ZIC2O95409 532 aaPredicted RBP10.41□□□□□ -0.74
SNX6-204ENST00000555541 F12P00748 615 aaPredicted RBP10.41□□□□□ -0.74
SNX6-204ENST00000555541 MTMR2Q13614 643 aa10.41□□□□□ -0.74
SNX6-204ENST00000555541 FAM174AQ8TBP5 190 aa10.41□□□□□ -0.74
SNX6-204ENST00000555541 GPR161Q8N6U8 529 aaKnown RBP10.39□□□□□ -0.75
SNX6-204ENST00000555541 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
SNX6-204ENST00000555541 GJA5P36382 358 aa10.38□□□□□ -0.75
SNX6-204ENST00000555541 NR5A1Q13285 461 aa10.38□□□□□ -0.75
SNX6-204ENST00000555541 CFAP99D6REC4 459 aa10.37□□□□□ -0.75
SNX6-204ENST00000555541 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
SNX6-204ENST00000555541 MAN1A2O60476 641 aa10.37□□□□□ -0.75
SNX6-204ENST00000555541 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
SNX6-204ENST00000555541 DNMT3LQ9UJW3 386 aa10.37□□□□□ -0.75
SNX6-204ENST00000555541 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
SNX6-204ENST00000555541 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
SNX6-204ENST00000555541 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
SNX6-204ENST00000555541 RASSF7Q02833 373 aa10.34□□□□□ -0.75
SNX6-204ENST00000555541 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
SNX6-204ENST00000555541 AMHR2Q16671 573 aa10.33□□□□□ -0.76
SNX6-204ENST00000555541 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
SNX6-204ENST00000555541 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
SNX6-204ENST00000555541 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
SNX6-204ENST00000555541 CTHP32929 405 aa10.32□□□□□ -0.76
SNX6-204ENST00000555541 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
SNX6-204ENST00000555541 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
SNX6-204ENST00000555541 TMEM151AQ8N4L1 468 aa10.32□□□□□ -0.76
SNX6-204ENST00000555541 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
SNX6-204ENST00000555541 ZMYND10O75800 440 aa10.31□□□□□ -0.76
SNX6-204ENST00000555541 GDF11O95390 407 aa10.3□□□□□ -0.76
SNX6-204ENST00000555541 BMP2P12643 396 aa10.3□□□□□ -0.76
SNX6-204ENST00000555541 SH3RF1Q7Z6J0 888 aa10.3□□□□□ -0.76
SNX6-204ENST00000555541 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
SNX6-204ENST00000555541 SPTLC1O15269 473 aa10.29□□□□□ -0.76
SNX6-204ENST00000555541 HRCP23327 699 aa10.29□□□□□ -0.76
SNX6-204ENST00000555541 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
SNX6-204ENST00000555541 NANOS1Q8WY41 292 aaKnown RBP10.29□□□□□ -0.76
SNX6-204ENST00000555541 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
SNX6-204ENST00000555541 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
SNX6-204ENST00000555541 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
SNX6-204ENST00000555541 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
SNX6-204ENST00000555541 RNFT1Q5M7Z0 435 aa10.27□□□□□ -0.77
SNX6-204ENST00000555541 ZNF385CQ66K41 422 aaPredicted RBP10.27□□□□□ -0.77
SNX6-204ENST00000555541 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
SNX6-204ENST00000555541 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
SNX6-204ENST00000555541 MAP4K5Q9Y4K4 846 aa10.27□□□□□ -0.77
SNX6-204ENST00000555541 PTSQ03393 145 aa10.25□□□□□ -0.77
SNX6-204ENST00000555541 TRMT44Q8IYL2 757 aaKnown RBP10.25□□□□□ -0.77
SNX6-204ENST00000555541 ARHGEF15O94989 841 aa10.24□□□□□ -0.77
SNX6-204ENST00000555541 UPP2O95045 317 aa10.24□□□□□ -0.77
SNX6-204ENST00000555541 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
SNX6-204ENST00000555541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.24□□□□□ -0.77
SNX6-204ENST00000555541 PRPF38BQ5VTL8 546 aaKnown RBP10.24□□□□□ -0.77
SNX6-204ENST00000555541 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
SNX6-204ENST00000555541 TSEN34Q9BSV6 310 aaKnown RBP10.24□□□□□ -0.77
SNX6-204ENST00000555541 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
SNX6-204ENST00000555541 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
SNX6-204ENST00000555541 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
SNX6-204ENST00000555541 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
SNX6-204ENST00000555541 TTLL8A6PVC2 850 aa10.22□□□□□ -0.77
SNX6-204ENST00000555541 FSHRP23945 695 aa10.22□□□□□ -0.77
SNX6-204ENST00000555541 CABLES1Q8TDN4 633 aa10.22□□□□□ -0.77
SNX6-204ENST00000555541 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.77
SNX6-204ENST00000555541 Q6ZVU0 165 aa10.21□□□□□ -0.77
SNX6-204ENST00000555541 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
SNX6-204ENST00000555541 AGERQ15109 404 aa10.2□□□□□ -0.78
SNX6-204ENST00000555541 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
SNX6-204ENST00000555541 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
SNX6-204ENST00000555541 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
SNX6-204ENST00000555541 PARP9Q8IXQ6 854 aa10.19□□□□□ -0.78
SNX6-204ENST00000555541 SPINT1O43278 529 aa10.18□□□□□ -0.78
SNX6-204ENST00000555541 RIC3Q7Z5B4 369 aa10.18□□□□□ -0.78
SNX6-204ENST00000555541 CCDC116Q8IYX3 515 aa10.18□□□□□ -0.78
SNX6-204ENST00000555541 DNMT3AQ9Y6K1 912 aaPredicted RBP10.18□□□□□ -0.78
SNX6-204ENST00000555541 VASH1Q7L8A9 365 aaPredicted RBP10.17□□□□□ -0.78
SNX6-204ENST00000555541 FIGNL2A6NMB9 653 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms