RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NUDT16Q96DE0 195 aaKnown RBP31.63■■■□□ 2.65
TMEM260-207ENST00000555497 ROBO2Q9HCK4 1378 aa31.62■■■□□ 2.65
TMEM260-207ENST00000555497 NCBP3Q53F19 620 aaKnown RBP31.62■■■□□ 2.65
TMEM260-207ENST00000555497 C3P01024 1663 aa31.6■■■□□ 2.65
TMEM260-207ENST00000555497 PLEKHG1Q9ULL1 1385 aa31.58■■■□□ 2.65
TMEM260-207ENST00000555497 DIAPH1O60610 1272 aaKnown RBP31.58■■■□□ 2.65
TMEM260-207ENST00000555497 POLKQ9UBT6 870 aa31.58■■■□□ 2.65
TMEM260-207ENST00000555497 KDM2BQ8NHM5 1336 aa31.58■■■□□ 2.65
TMEM260-207ENST00000555497 EDC4Q6P2E9 1401 aaKnown RBP31.58■■■□□ 2.65
TMEM260-207ENST00000555497 SKAP1Q86WV1 359 aa31.57■■■□□ 2.65
TMEM260-207ENST00000555497 TCERG1O14776 1098 aaKnown RBP31.56■■■□□ 2.64
TMEM260-207ENST00000555497 NME9Q86XW9 330 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 PRR36Q9H6K5 1346 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 ZRANB1Q9UGI0 708 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 CCDC61Q9Y6R9 512 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 MAP2P11137 1827 aaKnown RBP31.56■■■□□ 2.64
TMEM260-207ENST00000555497 CDC42BPGQ6DT37 1551 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 PLPPR3Q6T4P5 718 aa31.56■■■□□ 2.64
TMEM260-207ENST00000555497 TMPOP42166 694 aaKnown RBP31.55■■■□□ 2.64
TMEM260-207ENST00000555497 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.54■■■□□ 2.64
TMEM260-207ENST00000555497 RARSP54136 660 aaKnown RBP31.53■■■□□ 2.64
TMEM260-207ENST00000555497 TRIM35Q9UPQ4 493 aa31.53■■■□□ 2.64
TMEM260-207ENST00000555497 MON2Q7Z3U7 1717 aa31.52■■■□□ 2.64
TMEM260-207ENST00000555497 SLC26A8Q96RN1 970 aa31.52■■■□□ 2.64
TMEM260-207ENST00000555497 PPM1GO15355 546 aaPredicted RBP31.51■■■□□ 2.63
TMEM260-207ENST00000555497 FER1L4A9Z1Z3 1794 aa31.51■■■□□ 2.63
TMEM260-207ENST00000555497 PTPRUQ92729 1446 aa31.51■■■□□ 2.63
TMEM260-207ENST00000555497 AKAP12Q02952 1782 aa31.51■■■□□ 2.63
TMEM260-207ENST00000555497 MYH16Q9H6N6 1097 aa31.49■■■□□ 2.63
TMEM260-207ENST00000555497 MAPK8IP3Q9UPT6 1336 aa31.49■■■□□ 2.63
TMEM260-207ENST00000555497 PDE3AQ14432 1141 aa31.48■■■□□ 2.63
TMEM260-207ENST00000555497 EMILIN1Q9Y6C2 1016 aa31.48■■■□□ 2.63
TMEM260-207ENST00000555497 ARHGAP23Q9P227 1491 aa31.47■■■□□ 2.63
TMEM260-207ENST00000555497 SLIT1O75093 1534 aa31.47■■■□□ 2.63
TMEM260-207ENST00000555497 CENPQQ7L2Z9 268 aaPredicted RBP31.47■■■□□ 2.63
TMEM260-207ENST00000555497 ITSN1Q15811 1721 aa31.46■■■□□ 2.63
TMEM260-207ENST00000555497 PANK1Q8TE04 598 aa31.46■■■□□ 2.63
TMEM260-207ENST00000555497 EID1Q9Y6B2 187 aa31.46■■■□□ 2.63
TMEM260-207ENST00000555497 MS4A1P11836 297 aa31.45■■■□□ 2.62
TMEM260-207ENST00000555497 TSR2Q969E8 191 aaKnown RBP31.45■■■□□ 2.62
TMEM260-207ENST00000555497 FRAT1Q92837 279 aaPredicted RBP31.44■■■□□ 2.62
TMEM260-207ENST00000555497 LRRC7Q96NW7 1537 aa31.44■■■□□ 2.62
TMEM260-207ENST00000555497 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
TMEM260-207ENST00000555497 FCHSD2O94868 740 aa31.43■■■□□ 2.62
TMEM260-207ENST00000555497 BCL2L13Q9BXK5 485 aa31.43■■■□□ 2.62
TMEM260-207ENST00000555497 CANXP27824 592 aaKnown RBP31.43■■■□□ 2.62
TMEM260-207ENST00000555497 RIPK4P57078 832 aa31.43■■■□□ 2.62
TMEM260-207ENST00000555497 RSPH6AQ9H0K4 717 aa31.43■■■□□ 2.62
TMEM260-207ENST00000555497 PDE4AP27815 886 aa31.42■■■□□ 2.62
TMEM260-207ENST00000555497 COG6Q9Y2V7 657 aa31.42■■■□□ 2.62
TMEM260-207ENST00000555497 TNNQ9UQP3 1299 aa31.41■■■□□ 2.62
TMEM260-207ENST00000555497 ZNF692Q9BU19 519 aaPredicted RBP31.41■■■□□ 2.62
TMEM260-207ENST00000555497 AATKQ6ZMQ8 1374 aa31.4■■■□□ 2.62
TMEM260-207ENST00000555497 NUTM2FA1L443 756 aa31.4■■■□□ 2.62
TMEM260-207ENST00000555497 COG3Q96JB2 828 aa31.4■■■□□ 2.62
TMEM260-207ENST00000555497 TOPAZ1Q8N9V7 1692 aa31.39■■■□□ 2.62
TMEM260-207ENST00000555497 PRKAR2BP31323 418 aa31.39■■■□□ 2.62
TMEM260-207ENST00000555497 PNNQ9H307 717 aaKnown RBP31.39■■■□□ 2.62
TMEM260-207ENST00000555497 AMOTL2Q9Y2J4 779 aa31.39■■■□□ 2.61
TMEM260-207ENST00000555497 IL13P35225 146 aa31.38■■■□□ 2.61
TMEM260-207ENST00000555497 BACH2Q9BYV9 841 aa31.38■■■□□ 2.61
TMEM260-207ENST00000555497 CDK12Q9NYV4 1490 aaPredicted RBP31.37■■■□□ 2.61
TMEM260-207ENST00000555497 RLBP1P12271 317 aa31.37■■■□□ 2.61
TMEM260-207ENST00000555497 RRS1Q15050 365 aaKnown RBP31.37■■■□□ 2.61
TMEM260-207ENST00000555497 TBX22Q9Y458 520 aa31.37■■■□□ 2.61
TMEM260-207ENST00000555497 HMOX1P09601 288 aa31.36■■■□□ 2.61
TMEM260-207ENST00000555497 EXOSC9Q06265 439 aaKnown RBP31.36■■■□□ 2.61
TMEM260-207ENST00000555497 ACEP12821 1306 aa31.35■■■□□ 2.61
TMEM260-207ENST00000555497 IL16Q14005 1332 aa31.35■■■□□ 2.61
TMEM260-207ENST00000555497 PHACTR3Q96KR7 559 aa31.35■■■□□ 2.61
TMEM260-207ENST00000555497 THEMISQ8N1K5 641 aaPredicted RBP31.34■■■□□ 2.61
TMEM260-207ENST00000555497 PLEKHG3A1L390 1219 aa31.34■■■□□ 2.61
TMEM260-207ENST00000555497 NRKQ7Z2Y5 1582 aa31.34■■■□□ 2.61
TMEM260-207ENST00000555497 IGHDP01880 384 aa31.33■■■□□ 2.61
TMEM260-207ENST00000555497 TTC21BQ7Z4L5 1316 aa31.32■■■□□ 2.6
TMEM260-207ENST00000555497 CLUAP1Q96AJ1 413 aa31.32■■■□□ 2.6
TMEM260-207ENST00000555497 CT47B1P0C2W7 299 aaPredicted RBP31.3■■■□□ 2.6
TMEM260-207ENST00000555497 USP6P35125 1406 aa31.28■■■□□ 2.6
TMEM260-207ENST00000555497 PTCH1Q13635 1447 aa31.27■■■□□ 2.6
TMEM260-207ENST00000555497 ANP32AP39687 249 aaKnown RBP31.26■■■□□ 2.6
TMEM260-207ENST00000555497 NFE2L2Q16236 605 aa31.26■■■□□ 2.6
TMEM260-207ENST00000555497 SSH1Q8WYL5 1049 aa31.24■■■□□ 2.59
TMEM260-207ENST00000555497 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
TMEM260-207ENST00000555497 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
TMEM260-207ENST00000555497 DIP2AQ14689 1571 aa31.24■■■□□ 2.59
TMEM260-207ENST00000555497 NEFMP07197 916 aa31.23■■■□□ 2.59
TMEM260-207ENST00000555497 RGPD8O14715 1765 aaPredicted RBP31.23■■■□□ 2.59
TMEM260-207ENST00000555497 SMC4Q9NTJ3 1288 aa31.22■■■□□ 2.59
TMEM260-207ENST00000555497 SSH2Q76I76 1423 aa31.22■■■□□ 2.59
TMEM260-207ENST00000555497 ZKSCAN2Q63HK3 967 aa31.22■■■□□ 2.59
TMEM260-207ENST00000555497 THUMPD2Q9BTF0 503 aaKnown RBP31.22■■■□□ 2.59
TMEM260-207ENST00000555497 IPO9Q96P70 1041 aaKnown RBP31.21■■■□□ 2.59
TMEM260-207ENST00000555497 XRN1Q8IZH2 1706 aaKnown RBP31.21■■■□□ 2.59
TMEM260-207ENST00000555497 PMFBP1Q8TBY8 1022 aa31.21■■■□□ 2.59
TMEM260-207ENST00000555497 PCDHB15Q9Y5E8 787 aa31.2■■■□□ 2.59
TMEM260-207ENST00000555497 NPM2Q86SE8 214 aaKnown RBP31.2■■■□□ 2.58
TMEM260-207ENST00000555497 CEP170BQ9Y4F5 1589 aaPredicted RBP31.19■■■□□ 2.58
TMEM260-207ENST00000555497 RGS3P49796 1198 aa31.19■■■□□ 2.58
TMEM260-207ENST00000555497 ERICH6Q7L0X2 663 aa31.19■■■□□ 2.58
TMEM260-207ENST00000555497 PAK3O75914 559 aaPredicted RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms