RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 DIP2BQ9P265 1576 aa12.75□□□□□ -0.37
RPGRIP1-208ENST00000555489 ATP7BP35670 1465 aa12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 SPATA31D1Q6ZQQ2 1576 aa12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 LAS1LQ9Y4W2 734 aaKnown RBP12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
RPGRIP1-208ENST00000555489 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
RPGRIP1-208ENST00000555489 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
RPGRIP1-208ENST00000555489 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
RPGRIP1-208ENST00000555489 RLBP1P12271 317 aa12.71□□□□□ -0.37
RPGRIP1-208ENST00000555489 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
RPGRIP1-208ENST00000555489 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.38
RPGRIP1-208ENST00000555489 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.38
RPGRIP1-208ENST00000555489 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.38
RPGRIP1-208ENST00000555489 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 RIMS2Q9UQ26 1411 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 FCHSD2O94868 740 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
RPGRIP1-208ENST00000555489 SETD1AO15047 1707 aaKnown RBP12.69□□□□□ -0.38
RPGRIP1-208ENST00000555489 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
RPGRIP1-208ENST00000555489 KIF16BQ96L93 1317 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 RIPK4P57078 832 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 TSR2Q969E8 191 aaKnown RBP12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 ZNF428Q96B54 188 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
RPGRIP1-208ENST00000555489 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-208ENST00000555489 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
RPGRIP1-208ENST00000555489 IPO8O15397 1037 aaKnown RBP12.67□□□□□ -0.38
RPGRIP1-208ENST00000555489 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
RPGRIP1-208ENST00000555489 FAM135BQ49AJ0 1406 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 BECN1Q14457 450 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 TNNQ9UQP3 1299 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 USP19O94966 1318 aa12.66□□□□□ -0.38
RPGRIP1-208ENST00000555489 TRIM27P14373 513 aa12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 NFKBIBQ15653 356 aa12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.38
RPGRIP1-208ENST00000555489 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 AATKQ6ZMQ8 1374 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 NRXN3Q9Y4C0 1643 aa12.64□□□□□ -0.39
RPGRIP1-208ENST00000555489 TECPR2O15040 1411 aa12.63□□□□□ -0.39
RPGRIP1-208ENST00000555489 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
RPGRIP1-208ENST00000555489 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
RPGRIP1-208ENST00000555489 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
RPGRIP1-208ENST00000555489 CPS1P31327 1500 aa12.61□□□□□ -0.39
RPGRIP1-208ENST00000555489 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
RPGRIP1-208ENST00000555489 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
RPGRIP1-208ENST00000555489 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
RPGRIP1-208ENST00000555489 SEC24BO95487 1268 aa12.6□□□□□ -0.39
RPGRIP1-208ENST00000555489 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
RPGRIP1-208ENST00000555489 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
RPGRIP1-208ENST00000555489 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
RPGRIP1-208ENST00000555489 ZBTB40Q9NUA8 1239 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 GNAI1P63096 354 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 GSE1Q14687 1217 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
RPGRIP1-208ENST00000555489 METP08581 1390 aa12.58□□□□□ -0.39
RPGRIP1-208ENST00000555489 COG3Q96JB2 828 aa12.58□□□□□ -0.4
RPGRIP1-208ENST00000555489 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
RPGRIP1-208ENST00000555489 IL13P35225 146 aa12.58□□□□□ -0.4
RPGRIP1-208ENST00000555489 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
RPGRIP1-208ENST00000555489 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
RPGRIP1-208ENST00000555489 C3P01024 1663 aa12.56□□□□□ -0.4
RPGRIP1-208ENST00000555489 MLECQ14165 292 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms