RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
RPGRIP1-207ENST00000555322 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
RPGRIP1-207ENST00000555322 NALCNQ8IZF0 1738 aa12.12□□□□□ -0.47
RPGRIP1-207ENST00000555322 MTHFSP49914 203 aa12.12□□□□□ -0.47
RPGRIP1-207ENST00000555322 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
RPGRIP1-207ENST00000555322 USP54Q70EL1 1684 aa12.12□□□□□ -0.47
RPGRIP1-207ENST00000555322 NPHP4O75161 1426 aaPredicted RBP12.12□□□□□ -0.47
RPGRIP1-207ENST00000555322 RUNDC1Q96C34 613 aa12.11□□□□□ -0.47
RPGRIP1-207ENST00000555322 PRR36Q9H6K5 1346 aa12.11□□□□□ -0.47
RPGRIP1-207ENST00000555322 USP6P35125 1406 aa12.1□□□□□ -0.47
RPGRIP1-207ENST00000555322 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-207ENST00000555322 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
RPGRIP1-207ENST00000555322 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-207ENST00000555322 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
RPGRIP1-207ENST00000555322 SSH2Q76I76 1423 aa12.09□□□□□ -0.47
RPGRIP1-207ENST00000555322 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
RPGRIP1-207ENST00000555322 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
RPGRIP1-207ENST00000555322 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
RPGRIP1-207ENST00000555322 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
RPGRIP1-207ENST00000555322 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
RPGRIP1-207ENST00000555322 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
RPGRIP1-207ENST00000555322 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
RPGRIP1-207ENST00000555322 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
RPGRIP1-207ENST00000555322 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
RPGRIP1-207ENST00000555322 E9PSI1 815 aa12.07□□□□□ -0.48
RPGRIP1-207ENST00000555322 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
RPGRIP1-207ENST00000555322 COG3Q96JB2 828 aa12.06□□□□□ -0.48
RPGRIP1-207ENST00000555322 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
RPGRIP1-207ENST00000555322 BCL11AQ9H165 835 aa12.06□□□□□ -0.48
RPGRIP1-207ENST00000555322 APAF1O14727 1248 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 KCNA6P17658 529 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 SLFN5Q08AF3 891 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 ACEP12821 1306 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 RRP1P56182 461 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 WDR63Q8IWG1 891 aa12.05□□□□□ -0.48
RPGRIP1-207ENST00000555322 DUSP27Q5VZP5 1158 aa12.04□□□□□ -0.48
RPGRIP1-207ENST00000555322 NCOA3Q9Y6Q9 1424 aa12.04□□□□□ -0.48
RPGRIP1-207ENST00000555322 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPGRIP1-207ENST00000555322 CCDC146Q8IYE0 955 aa12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 POLKQ9UBT6 870 aa12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 U2AF1L5P0DN76 240 aaPredicted RBP12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 U2AF1Q01081 240 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
RPGRIP1-207ENST00000555322 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.48
RPGRIP1-207ENST00000555322 NME9Q86XW9 330 aa12.02□□□□□ -0.49
RPGRIP1-207ENST00000555322 FCHSD2O94868 740 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 WWC1Q8IX03 1113 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 PIK3C2AO00443 1686 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 IL16Q14005 1332 aa12.01□□□□□ -0.49
RPGRIP1-207ENST00000555322 MAPK8IP3Q9UPT6 1336 aa12□□□□□ -0.49
RPGRIP1-207ENST00000555322 DCCP43146 1447 aa12□□□□□ -0.49
RPGRIP1-207ENST00000555322 GOLGA6L2Q8N9W4 650 aaPredicted RBP12□□□□□ -0.49
RPGRIP1-207ENST00000555322 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
RPGRIP1-207ENST00000555322 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
RPGRIP1-207ENST00000555322 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
RPGRIP1-207ENST00000555322 CT47B1P0C2W7 299 aaPredicted RBP11.98□□□□□ -0.49
RPGRIP1-207ENST00000555322 NEFMP07197 916 aa11.98□□□□□ -0.49
RPGRIP1-207ENST00000555322 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
RPGRIP1-207ENST00000555322 MARF1Q9Y4F3 1742 aaKnown RBP11.98□□□□□ -0.49
RPGRIP1-207ENST00000555322 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
RPGRIP1-207ENST00000555322 IL13P35225 146 aa11.97□□□□□ -0.49
RPGRIP1-207ENST00000555322 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
RPGRIP1-207ENST00000555322 SBNO1A3KN83 1393 aa11.97□□□□□ -0.49
RPGRIP1-207ENST00000555322 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
RPGRIP1-207ENST00000555322 PHRF1Q9P1Y6 1649 aaKnown RBP11.96□□□□□ -0.49
RPGRIP1-207ENST00000555322 RTL1A6NKG5 1358 aa11.96□□□□□ -0.49
RPGRIP1-207ENST00000555322 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
RPGRIP1-207ENST00000555322 MST1RQ04912 1400 aa11.96□□□□□ -0.49
RPGRIP1-207ENST00000555322 PEAK1Q9H792 1746 aa11.96□□□□□ -0.49
RPGRIP1-207ENST00000555322 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.5
RPGRIP1-207ENST00000555322 FLT4P35916 1363 aa11.95□□□□□ -0.5
RPGRIP1-207ENST00000555322 CALD1Q05682 793 aaKnown RBP11.95□□□□□ -0.5
RPGRIP1-207ENST00000555322 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
RPGRIP1-207ENST00000555322 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
RPGRIP1-207ENST00000555322 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
RPGRIP1-207ENST00000555322 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
RPGRIP1-207ENST00000555322 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
RPGRIP1-207ENST00000555322 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
RPGRIP1-207ENST00000555322 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
RPGRIP1-207ENST00000555322 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
RPGRIP1-207ENST00000555322 PMFBP1Q8TBY8 1022 aa11.92□□□□□ -0.5
RPGRIP1-207ENST00000555322 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 SLIT3O75094 1523 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 NFAT5O94916 1531 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 AAMPQ13685 434 aa11.91□□□□□ -0.5
RPGRIP1-207ENST00000555322 KDRP35968 1356 aa11.9□□□□□ -0.5
RPGRIP1-207ENST00000555322 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
RPGRIP1-207ENST00000555322 CCDC136Q96JN2 1154 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms