RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PRR36Q9H6K5 1346 aa19.09■□□□□ 0.65
IFT43-209ENST00000555305 E9PSI1 815 aa19.09■□□□□ 0.65
IFT43-209ENST00000555305 COG3Q96JB2 828 aa19.09■□□□□ 0.65
IFT43-209ENST00000555305 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.65
IFT43-209ENST00000555305 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
IFT43-209ENST00000555305 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
IFT43-209ENST00000555305 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
IFT43-209ENST00000555305 DIAPH1O60610 1272 aaKnown RBP19.06■□□□□ 0.64
IFT43-209ENST00000555305 U2AF1L5P0DN76 240 aaPredicted RBP19.06■□□□□ 0.64
IFT43-209ENST00000555305 U2AF1Q01081 240 aaKnown RBP eCLIP19.06■□□□□ 0.64
IFT43-209ENST00000555305 IQSEC2Q5JU85 1478 aa19.06■□□□□ 0.64
IFT43-209ENST00000555305 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
IFT43-209ENST00000555305 SLFN5Q08AF3 891 aa19.06■□□□□ 0.64
IFT43-209ENST00000555305 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
IFT43-209ENST00000555305 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
IFT43-209ENST00000555305 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
IFT43-209ENST00000555305 USP6P35125 1406 aa19.04■□□□□ 0.64
IFT43-209ENST00000555305 ACEP12821 1306 aa19.04■□□□□ 0.64
IFT43-209ENST00000555305 KCNA6P17658 529 aa19.04■□□□□ 0.64
IFT43-209ENST00000555305 TRMT2AQ8IZ69 625 aaKnown RBP19.04■□□□□ 0.64
IFT43-209ENST00000555305 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
IFT43-209ENST00000555305 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
IFT43-209ENST00000555305 WDR63Q8IWG1 891 aa19.04■□□□□ 0.64
IFT43-209ENST00000555305 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
IFT43-209ENST00000555305 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.64
IFT43-209ENST00000555305 WWC1Q8IX03 1113 aa19.02■□□□□ 0.64
IFT43-209ENST00000555305 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.64
IFT43-209ENST00000555305 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
IFT43-209ENST00000555305 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
IFT43-209ENST00000555305 CHD2O14647 1828 aaKnown RBP19.01■□□□□ 0.63
IFT43-209ENST00000555305 NME9Q86XW9 330 aa19.01■□□□□ 0.63
IFT43-209ENST00000555305 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
IFT43-209ENST00000555305 FCHSD2O94868 740 aa19.01■□□□□ 0.63
IFT43-209ENST00000555305 NEFMP07197 916 aa19.01■□□□□ 0.63
IFT43-209ENST00000555305 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
IFT43-209ENST00000555305 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
IFT43-209ENST00000555305 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
IFT43-209ENST00000555305 GOLGA6L2Q8N9W4 650 aaPredicted RBP19■□□□□ 0.63
IFT43-209ENST00000555305 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
IFT43-209ENST00000555305 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
IFT43-209ENST00000555305 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
IFT43-209ENST00000555305 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
IFT43-209ENST00000555305 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
IFT43-209ENST00000555305 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
IFT43-209ENST00000555305 USP31Q70CQ4 1352 aa18.96■□□□□ 0.63
IFT43-209ENST00000555305 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
IFT43-209ENST00000555305 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
IFT43-209ENST00000555305 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
IFT43-209ENST00000555305 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
IFT43-209ENST00000555305 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
IFT43-209ENST00000555305 NUTM2FA1L443 756 aa18.93■□□□□ 0.62
IFT43-209ENST00000555305 IL16Q14005 1332 aa18.93■□□□□ 0.62
IFT43-209ENST00000555305 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
IFT43-209ENST00000555305 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
IFT43-209ENST00000555305 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
IFT43-209ENST00000555305 IL13P35225 146 aa18.91■□□□□ 0.62
IFT43-209ENST00000555305 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
IFT43-209ENST00000555305 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
IFT43-209ENST00000555305 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
IFT43-209ENST00000555305 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
IFT43-209ENST00000555305 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
IFT43-209ENST00000555305 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
IFT43-209ENST00000555305 CALD1Q05682 793 aaKnown RBP18.89■□□□□ 0.61
IFT43-209ENST00000555305 RSPH6AQ9H0K4 717 aa18.89■□□□□ 0.61
IFT43-209ENST00000555305 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
IFT43-209ENST00000555305 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
IFT43-209ENST00000555305 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
IFT43-209ENST00000555305 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
IFT43-209ENST00000555305 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
IFT43-209ENST00000555305 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
IFT43-209ENST00000555305 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
IFT43-209ENST00000555305 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
IFT43-209ENST00000555305 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
IFT43-209ENST00000555305 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
IFT43-209ENST00000555305 RIPK4P57078 832 aa18.85■□□□□ 0.61
IFT43-209ENST00000555305 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
IFT43-209ENST00000555305 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
IFT43-209ENST00000555305 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.61
IFT43-209ENST00000555305 RGPD8O14715 1765 aaPredicted RBP18.83■□□□□ 0.61
IFT43-209ENST00000555305 FLT4P35916 1363 aa18.83■□□□□ 0.6
IFT43-209ENST00000555305 FBLN1P23142 703 aa18.83■□□□□ 0.6
IFT43-209ENST00000555305 NFE2L2Q16236 605 aa18.83■□□□□ 0.6
IFT43-209ENST00000555305 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
IFT43-209ENST00000555305 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
IFT43-209ENST00000555305 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
IFT43-209ENST00000555305 NLRP6P59044 892 aa18.81■□□□□ 0.6
IFT43-209ENST00000555305 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
IFT43-209ENST00000555305 PROSER2Q86WR7 435 aaPredicted RBP18.81■□□□□ 0.6
IFT43-209ENST00000555305 DCCP43146 1447 aa18.8■□□□□ 0.6
IFT43-209ENST00000555305 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
IFT43-209ENST00000555305 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
IFT43-209ENST00000555305 AAMPQ13685 434 aa18.79■□□□□ 0.6
IFT43-209ENST00000555305 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
IFT43-209ENST00000555305 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
IFT43-209ENST00000555305 PLIN1O60240 522 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 HMOX1P09601 288 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 RTL1A6NKG5 1358 aa18.78■□□□□ 0.6
IFT43-209ENST00000555305 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms