RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
PABPN1-205ENST00000555295 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
PABPN1-205ENST00000555295 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
PABPN1-205ENST00000555295 A0A0G2JS52 829 aa18.43■□□□□ 0.54
PABPN1-205ENST00000555295 MYT1Q01538 1121 aa18.43■□□□□ 0.54
PABPN1-205ENST00000555295 PRDM11Q9NQV5 511 aa18.43■□□□□ 0.54
PABPN1-205ENST00000555295 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
PABPN1-205ENST00000555295 TOPAZ1Q8N9V7 1692 aa18.42■□□□□ 0.54
PABPN1-205ENST00000555295 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
PABPN1-205ENST00000555295 ACEP12821 1306 aa18.42■□□□□ 0.54
PABPN1-205ENST00000555295 PLEKHG3A1L390 1219 aa18.41■□□□□ 0.54
PABPN1-205ENST00000555295 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
PABPN1-205ENST00000555295 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
PABPN1-205ENST00000555295 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
PABPN1-205ENST00000555295 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
PABPN1-205ENST00000555295 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
PABPN1-205ENST00000555295 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
PABPN1-205ENST00000555295 SF3B2Q13435 895 aaKnown RBP18.39■□□□□ 0.53
PABPN1-205ENST00000555295 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
PABPN1-205ENST00000555295 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
PABPN1-205ENST00000555295 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
PABPN1-205ENST00000555295 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
PABPN1-205ENST00000555295 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
PABPN1-205ENST00000555295 BRD4O60885 1362 aaPredicted RBP18.37■□□□□ 0.53
PABPN1-205ENST00000555295 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
PABPN1-205ENST00000555295 TRPM1Q7Z4N2 1603 aa18.37■□□□□ 0.53
PABPN1-205ENST00000555295 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
PABPN1-205ENST00000555295 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
PABPN1-205ENST00000555295 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
PABPN1-205ENST00000555295 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
PABPN1-205ENST00000555295 CRYBG1Q9Y4K1 1723 aa18.36■□□□□ 0.53
PABPN1-205ENST00000555295 NUTM2GQ5VZR2 741 aa18.35■□□□□ 0.53
PABPN1-205ENST00000555295 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
PABPN1-205ENST00000555295 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
PABPN1-205ENST00000555295 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
PABPN1-205ENST00000555295 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
PABPN1-205ENST00000555295 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
PABPN1-205ENST00000555295 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
PABPN1-205ENST00000555295 SPATA31A5Q5VU36 1347 aa18.32■□□□□ 0.52
PABPN1-205ENST00000555295 SPATA31A7Q8IWB4 1347 aa18.32■□□□□ 0.52
PABPN1-205ENST00000555295 BRWD3Q6RI45 1802 aa18.32■□□□□ 0.52
PABPN1-205ENST00000555295 EVA1CP58658 441 aa18.31■□□□□ 0.52
PABPN1-205ENST00000555295 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
PABPN1-205ENST00000555295 STRN4Q9NRL3 753 aa18.31■□□□□ 0.52
PABPN1-205ENST00000555295 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
PABPN1-205ENST00000555295 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
PABPN1-205ENST00000555295 USP19O94966 1318 aa18.29■□□□□ 0.52
PABPN1-205ENST00000555295 USP6P35125 1406 aa18.29■□□□□ 0.52
PABPN1-205ENST00000555295 CPDO75976 1380 aa18.29■□□□□ 0.52
PABPN1-205ENST00000555295 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
PABPN1-205ENST00000555295 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
PABPN1-205ENST00000555295 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
PABPN1-205ENST00000555295 GCP02774 474 aa18.26■□□□□ 0.51
PABPN1-205ENST00000555295 BAG6P46379 1132 aa18.26■□□□□ 0.51
PABPN1-205ENST00000555295 NLRP6P59044 892 aa18.26■□□□□ 0.51
PABPN1-205ENST00000555295 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
PABPN1-205ENST00000555295 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
PABPN1-205ENST00000555295 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
PABPN1-205ENST00000555295 THSD7AQ9UPZ6 1657 aa18.24■□□□□ 0.51
PABPN1-205ENST00000555295 EP400Q96L91 3159 aa18.23■□□□□ 0.51
PABPN1-205ENST00000555295 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
PABPN1-205ENST00000555295 DEFB132Q7Z7B7 95 aa18.22■□□□□ 0.51
PABPN1-205ENST00000555295 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
PABPN1-205ENST00000555295 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
PABPN1-205ENST00000555295 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
PABPN1-205ENST00000555295 SLIT3O75094 1523 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 CAMTA1Q9Y6Y1 1673 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 THRAP3Q9Y2W1 955 aaKnown RBP18.2■□□□□ 0.5
PABPN1-205ENST00000555295 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
PABPN1-205ENST00000555295 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
PABPN1-205ENST00000555295 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
PABPN1-205ENST00000555295 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
PABPN1-205ENST00000555295 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
PABPN1-205ENST00000555295 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
PABPN1-205ENST00000555295 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
PABPN1-205ENST00000555295 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
PABPN1-205ENST00000555295 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
PABPN1-205ENST00000555295 CRB1P82279 1406 aa18.16■□□□□ 0.5
PABPN1-205ENST00000555295 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
PABPN1-205ENST00000555295 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
PABPN1-205ENST00000555295 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
PABPN1-205ENST00000555295 TMC1Q8TDI8 760 aa18.16■□□□□ 0.5
PABPN1-205ENST00000555295 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
PABPN1-205ENST00000555295 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
PABPN1-205ENST00000555295 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
PABPN1-205ENST00000555295 SOX12O15370 315 aa18.13■□□□□ 0.49
PABPN1-205ENST00000555295 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
PABPN1-205ENST00000555295 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
PABPN1-205ENST00000555295 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
PABPN1-205ENST00000555295 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
PABPN1-205ENST00000555295 TRIM37O94972 964 aa18.11■□□□□ 0.49
PABPN1-205ENST00000555295 EN1Q05925 392 aaPredicted RBP18.11■□□□□ 0.49
PABPN1-205ENST00000555295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
PABPN1-205ENST00000555295 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
PABPN1-205ENST00000555295 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
PABPN1-205ENST00000555295 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
PABPN1-205ENST00000555295 NINLQ9Y2I6 1382 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms