RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 F6X3S4 739 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 GNAI1P63096 354 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 FAM161AQ3B820 660 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 ANXA1P04083 346 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 ATP10AO60312 1499 aa15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 TSPOAP1O95153 1857 aa15.31■□□□□ 0.04
ARHGEF40-206ENST00000555232 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 KAT6BQ8WYB5 2073 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 IGHDP01880 384 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 EVA1CP58658 441 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 RLBP1P12271 317 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 KCNJ4P48050 445 aa15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
ARHGEF40-206ENST00000555232 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
ARHGEF40-206ENST00000555232 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
ARHGEF40-206ENST00000555232 TNRQ92752 1358 aa15.29■□□□□ 0.04
ARHGEF40-206ENST00000555232 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
ARHGEF40-206ENST00000555232 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
ARHGEF40-206ENST00000555232 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF40-206ENST00000555232 ATF7IPQ6VMQ6 1270 aa15.27■□□□□ 0.04
ARHGEF40-206ENST00000555232 DDX54Q8TDD1 881 aaKnown RBP15.27■□□□□ 0.04
ARHGEF40-206ENST00000555232 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.04
ARHGEF40-206ENST00000555232 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.04
ARHGEF40-206ENST00000555232 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.03
ARHGEF40-206ENST00000555232 MPRIPQ6WCQ1 1025 aa15.26■□□□□ 0.03
ARHGEF40-206ENST00000555232 NPHP1O15259 732 aa15.26■□□□□ 0.03
ARHGEF40-206ENST00000555232 FCHSD2O94868 740 aa15.26■□□□□ 0.03
ARHGEF40-206ENST00000555232 NFE2L2Q16236 605 aa15.26■□□□□ 0.03
ARHGEF40-206ENST00000555232 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
ARHGEF40-206ENST00000555232 TRIM27P14373 513 aa15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 RAPGEF4Q8WZA2 1011 aa15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 ZNF530Q6P9A1 599 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 COL17A1Q9UMD9 1497 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 MYO5CQ9NQX4 1742 aa15.25■□□□□ 0.03
ARHGEF40-206ENST00000555232 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 FAM177BA6PVY3 158 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 MYL6BP14649 208 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
ARHGEF40-206ENST00000555232 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
ARHGEF40-206ENST00000555232 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
ARHGEF40-206ENST00000555232 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF40-206ENST00000555232 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
ARHGEF40-206ENST00000555232 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 GSE1Q14687 1217 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 GLIPR1L2Q4G1C9 344 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 NUTM2AQ8IVF1 878 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 C8orf58Q8NAV2 365 aa15.22■□□□□ 0.03
ARHGEF40-206ENST00000555232 PPIP5K1Q6PFW1 1433 aa15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 ABCC1P33527 1531 aa15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 TTC21BQ7Z4L5 1316 aa15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 YTHDC2Q9H6S0 1430 aaKnown RBP15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 JARID2Q92833 1246 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-206ENST00000555232 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.02
ARHGEF40-206ENST00000555232 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 TSHZ3Q63HK5 1081 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 EIF4A2Q14240 407 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
ARHGEF40-206ENST00000555232 CDC42BPBQ9Y5S2 1711 aa15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 METP08581 1390 aa15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 IL1RAPL2Q9NP60 686 aa15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
ARHGEF40-206ENST00000555232 FGD1P98174 961 aa15.18■□□□□ 0.02
ARHGEF40-206ENST00000555232 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
ARHGEF40-206ENST00000555232 PRDM11Q9NQV5 511 aa15.18■□□□□ 0.02
ARHGEF40-206ENST00000555232 ADGBQ8N7X0 1667 aa15.17■□□□□ 0.02
ARHGEF40-206ENST00000555232 SIL1Q9H173 461 aa15.17■□□□□ 0.02
ARHGEF40-206ENST00000555232 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
ARHGEF40-206ENST00000555232 HMMRO75330 724 aa15.17■□□□□ 0.02
ARHGEF40-206ENST00000555232 PTPRTO14522 1441 aa15.16■□□□□ 0.02
ARHGEF40-206ENST00000555232 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms