RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
ARHGEF40-205ENST00000555052 TOPAZ1Q8N9V7 1692 aa22.85■■□□□ 1.25
ARHGEF40-205ENST00000555052 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
ARHGEF40-205ENST00000555052 BTG4Q9NY30 223 aa22.83■■□□□ 1.25
ARHGEF40-205ENST00000555052 CCDC9Q9Y3X0 531 aaKnown RBP22.83■■□□□ 1.25
ARHGEF40-205ENST00000555052 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
ARHGEF40-205ENST00000555052 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
ARHGEF40-205ENST00000555052 ZRANB1Q9UGI0 708 aa22.81■■□□□ 1.24
ARHGEF40-205ENST00000555052 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
ARHGEF40-205ENST00000555052 NBPF1Q3BBV0 1214 aa22.8■■□□□ 1.24
ARHGEF40-205ENST00000555052 KRT27Q7Z3Y8 459 aa22.8■■□□□ 1.24
ARHGEF40-205ENST00000555052 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
ARHGEF40-205ENST00000555052 FAM98CQ17RN3 349 aaKnown RBP22.77■■□□□ 1.24
ARHGEF40-205ENST00000555052 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
ARHGEF40-205ENST00000555052 SPATA31A5Q5VU36 1347 aa22.77■■□□□ 1.24
ARHGEF40-205ENST00000555052 SPATA31A7Q8IWB4 1347 aa22.77■■□□□ 1.24
ARHGEF40-205ENST00000555052 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
ARHGEF40-205ENST00000555052 DEFB132Q7Z7B7 95 aa22.76■■□□□ 1.23
ARHGEF40-205ENST00000555052 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
ARHGEF40-205ENST00000555052 THSD7AQ9UPZ6 1657 aa22.75■■□□□ 1.23
ARHGEF40-205ENST00000555052 ACEP12821 1306 aa22.75■■□□□ 1.23
ARHGEF40-205ENST00000555052 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
ARHGEF40-205ENST00000555052 NBPF8Q3BBV2 869 aa22.74■■□□□ 1.23
ARHGEF40-205ENST00000555052 A0A0G2JS52 829 aa22.72■■□□□ 1.23
ARHGEF40-205ENST00000555052 MYT1Q01538 1121 aa22.72■■□□□ 1.23
ARHGEF40-205ENST00000555052 SF3B2Q13435 895 aaKnown RBP22.71■■□□□ 1.23
ARHGEF40-205ENST00000555052 CENPJQ9HC77 1338 aaPredicted RBP22.71■■□□□ 1.23
ARHGEF40-205ENST00000555052 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
ARHGEF40-205ENST00000555052 QRICH2Q9H0J4 1663 aa22.69■■□□□ 1.22
ARHGEF40-205ENST00000555052 USP19O94966 1318 aa22.69■■□□□ 1.22
ARHGEF40-205ENST00000555052 SPATA31A1Q5TZJ5 1347 aa22.69■■□□□ 1.22
ARHGEF40-205ENST00000555052 CHRNA2Q15822 529 aa22.69■■□□□ 1.22
ARHGEF40-205ENST00000555052 NUTM2GQ5VZR2 741 aa22.69■■□□□ 1.22
ARHGEF40-205ENST00000555052 PPIP5K1Q6PFW1 1433 aa22.68■■□□□ 1.22
ARHGEF40-205ENST00000555052 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
ARHGEF40-205ENST00000555052 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
ARHGEF40-205ENST00000555052 CPDO75976 1380 aa22.66■■□□□ 1.22
ARHGEF40-205ENST00000555052 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
ARHGEF40-205ENST00000555052 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
ARHGEF40-205ENST00000555052 CABP2Q9NPB3 220 aa22.65■■□□□ 1.22
ARHGEF40-205ENST00000555052 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
ARHGEF40-205ENST00000555052 ABTB2Q8N961 1025 aa22.64■■□□□ 1.21
ARHGEF40-205ENST00000555052 CAMTA1Q9Y6Y1 1673 aa22.64■■□□□ 1.21
ARHGEF40-205ENST00000555052 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
ARHGEF40-205ENST00000555052 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.21
ARHGEF40-205ENST00000555052 BRD4O60885 1362 aaPredicted RBP22.63■■□□□ 1.21
ARHGEF40-205ENST00000555052 BAG6P46379 1132 aa22.63■■□□□ 1.21
ARHGEF40-205ENST00000555052 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
ARHGEF40-205ENST00000555052 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
ARHGEF40-205ENST00000555052 DISP2A7MBM2 1401 aa22.62■■□□□ 1.21
ARHGEF40-205ENST00000555052 TNS1Q9HBL0 1735 aaKnown RBP22.62■■□□□ 1.21
ARHGEF40-205ENST00000555052 USP6P35125 1406 aa22.6■■□□□ 1.21
ARHGEF40-205ENST00000555052 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
ARHGEF40-205ENST00000555052 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
ARHGEF40-205ENST00000555052 GCP02774 474 aa22.58■■□□□ 1.21
ARHGEF40-205ENST00000555052 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
ARHGEF40-205ENST00000555052 CABP1Q9NZU7 370 aa22.58■■□□□ 1.21
ARHGEF40-205ENST00000555052 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
ARHGEF40-205ENST00000555052 LRP5O75197 1615 aa22.57■■□□□ 1.2
ARHGEF40-205ENST00000555052 SLIT3O75094 1523 aa22.57■■□□□ 1.2
ARHGEF40-205ENST00000555052 EN1Q05925 392 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF40-205ENST00000555052 COL5A2P05997 1499 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF40-205ENST00000555052 EVA1CP58658 441 aa22.55■■□□□ 1.2
ARHGEF40-205ENST00000555052 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
ARHGEF40-205ENST00000555052 EVC2Q86UK5 1308 aa22.55■■□□□ 1.2
ARHGEF40-205ENST00000555052 ROCK2O75116 1388 aaKnown RBP22.54■■□□□ 1.2
ARHGEF40-205ENST00000555052 FAM196AQ6ZSG2 479 aa22.54■■□□□ 1.2
ARHGEF40-205ENST00000555052 PIK3C2AO00443 1686 aa22.54■■□□□ 1.2
ARHGEF40-205ENST00000555052 TCP11L2Q8N4U5 519 aa22.53■■□□□ 1.2
ARHGEF40-205ENST00000555052 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
ARHGEF40-205ENST00000555052 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
ARHGEF40-205ENST00000555052 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
ARHGEF40-205ENST00000555052 TRIM37O94972 964 aa22.5■■□□□ 1.19
ARHGEF40-205ENST00000555052 NLRP6P59044 892 aa22.5■■□□□ 1.19
ARHGEF40-205ENST00000555052 THRAP3Q9Y2W1 955 aaKnown RBP22.5■■□□□ 1.19
ARHGEF40-205ENST00000555052 PARP4Q9UKK3 1724 aaKnown RBP22.5■■□□□ 1.19
ARHGEF40-205ENST00000555052 COL18A1P39060 1754 aa22.49■■□□□ 1.19
ARHGEF40-205ENST00000555052 AKAP12Q02952 1782 aa22.49■■□□□ 1.19
ARHGEF40-205ENST00000555052 CAMKK2Q96RR4 588 aa22.49■■□□□ 1.19
ARHGEF40-205ENST00000555052 EZH2Q15910 746 aaKnown RBP22.48■■□□□ 1.19
ARHGEF40-205ENST00000555052 CRB1P82279 1406 aa22.48■■□□□ 1.19
ARHGEF40-205ENST00000555052 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
ARHGEF40-205ENST00000555052 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
ARHGEF40-205ENST00000555052 SBNO2Q9Y2G9 1366 aa22.46■■□□□ 1.19
ARHGEF40-205ENST00000555052 CPSF1Q10570 1443 aaKnown RBP22.46■■□□□ 1.19
ARHGEF40-205ENST00000555052 ZNF692Q9BU19 519 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF40-205ENST00000555052 TTC21BQ7Z4L5 1316 aa22.45■■□□□ 1.18
ARHGEF40-205ENST00000555052 RREB1Q92766 1687 aa22.44■■□□□ 1.18
ARHGEF40-205ENST00000555052 APBA3O96018 575 aa22.43■■□□□ 1.18
ARHGEF40-205ENST00000555052 R3HDM1Q15032 1099 aaKnown RBP22.43■■□□□ 1.18
ARHGEF40-205ENST00000555052 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
ARHGEF40-205ENST00000555052 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
ARHGEF40-205ENST00000555052 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
ARHGEF40-205ENST00000555052 LRRC37A3O60309 1634 aa22.42■■□□□ 1.18
ARHGEF40-205ENST00000555052 NFAT5O94916 1531 aa22.41■■□□□ 1.18
ARHGEF40-205ENST00000555052 ARHGEF25Q86VW2 580 aa22.41■■□□□ 1.18
ARHGEF40-205ENST00000555052 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
ARHGEF40-205ENST00000555052 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
ARHGEF40-205ENST00000555052 WNK3Q9BYP7 1800 aa22.4■■□□□ 1.18
ARHGEF40-205ENST00000555052 NUP188Q5SRE5 1749 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms