RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 USP54Q70EL1 1684 aa20.42■□□□□ 0.86
PSMA6-208ENST00000554843 PSME1Q06323 249 aa20.41■□□□□ 0.86
PSMA6-208ENST00000554843 KRT28Q7Z3Y7 464 aa20.41■□□□□ 0.86
PSMA6-208ENST00000554843 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
PSMA6-208ENST00000554843 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
PSMA6-208ENST00000554843 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
PSMA6-208ENST00000554843 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
PSMA6-208ENST00000554843 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
PSMA6-208ENST00000554843 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
PSMA6-208ENST00000554843 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
PSMA6-208ENST00000554843 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
PSMA6-208ENST00000554843 XPCQ01831 940 aaPredicted RBP20.38■□□□□ 0.85
PSMA6-208ENST00000554843 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
PSMA6-208ENST00000554843 NSD2O96028 1365 aa20.37■□□□□ 0.85
PSMA6-208ENST00000554843 NPC1L1Q9UHC9 1359 aa20.37■□□□□ 0.85
PSMA6-208ENST00000554843 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
PSMA6-208ENST00000554843 ARHGEF10O15013 1369 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 CGNL1Q0VF96 1302 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
PSMA6-208ENST00000554843 USP31Q70CQ4 1352 aa20.35■□□□□ 0.85
PSMA6-208ENST00000554843 FBXO41Q8TF61 875 aa20.35■□□□□ 0.85
PSMA6-208ENST00000554843 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
PSMA6-208ENST00000554843 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
PSMA6-208ENST00000554843 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
PSMA6-208ENST00000554843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.85
PSMA6-208ENST00000554843 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
PSMA6-208ENST00000554843 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
PSMA6-208ENST00000554843 LRRC59Q96AG4 307 aaKnown RBP20.32■□□□□ 0.84
PSMA6-208ENST00000554843 CRYBG1Q9Y4K1 1723 aa20.32■□□□□ 0.84
PSMA6-208ENST00000554843 NME9Q86XW9 330 aa20.31■□□□□ 0.84
PSMA6-208ENST00000554843 SLIT3O75094 1523 aa20.31■□□□□ 0.84
PSMA6-208ENST00000554843 FYB1O15117 783 aa20.3■□□□□ 0.84
PSMA6-208ENST00000554843 PNPLA6Q8IY17 1366 aa20.3■□□□□ 0.84
PSMA6-208ENST00000554843 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
PSMA6-208ENST00000554843 USP19O94966 1318 aa20.29■□□□□ 0.84
PSMA6-208ENST00000554843 PHRF1Q9P1Y6 1649 aaKnown RBP20.29■□□□□ 0.84
PSMA6-208ENST00000554843 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
PSMA6-208ENST00000554843 HSPA1LP34931 641 aa20.28■□□□□ 0.84
PSMA6-208ENST00000554843 JCADQ9P266 1359 aa20.28■□□□□ 0.84
PSMA6-208ENST00000554843 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
PSMA6-208ENST00000554843 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
PSMA6-208ENST00000554843 NLRP6P59044 892 aa20.25■□□□□ 0.83
PSMA6-208ENST00000554843 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
PSMA6-208ENST00000554843 COG3Q96JB2 828 aa20.25■□□□□ 0.83
PSMA6-208ENST00000554843 NFAT5O94916 1531 aa20.24■□□□□ 0.83
PSMA6-208ENST00000554843 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
PSMA6-208ENST00000554843 PARD3Q8TEW0 1356 aa20.23■□□□□ 0.83
PSMA6-208ENST00000554843 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
PSMA6-208ENST00000554843 NUTM2GQ5VZR2 741 aa20.22■□□□□ 0.83
PSMA6-208ENST00000554843 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
PSMA6-208ENST00000554843 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
PSMA6-208ENST00000554843 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
PSMA6-208ENST00000554843 SPATA31A6Q5VVP1 1343 aa20.19■□□□□ 0.82
PSMA6-208ENST00000554843 RALBP1Q15311 655 aa20.18■□□□□ 0.82
PSMA6-208ENST00000554843 SMG6Q86US8 1419 aaKnown RBP20.18■□□□□ 0.82
PSMA6-208ENST00000554843 ABCC6O95255 1503 aa20.17■□□□□ 0.82
PSMA6-208ENST00000554843 GCP02774 474 aa20.16■□□□□ 0.82
PSMA6-208ENST00000554843 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
PSMA6-208ENST00000554843 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
PSMA6-208ENST00000554843 CPDO75976 1380 aa20.16■□□□□ 0.82
PSMA6-208ENST00000554843 CABLES1Q8TDN4 633 aa20.15■□□□□ 0.82
PSMA6-208ENST00000554843 LTN1O94822 1766 aa20.15■□□□□ 0.82
PSMA6-208ENST00000554843 KIF24Q5T7B8 1368 aa20.14■□□□□ 0.81
PSMA6-208ENST00000554843 ANP32CO43423 234 aa20.14■□□□□ 0.81
PSMA6-208ENST00000554843 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
PSMA6-208ENST00000554843 LRP6O75581 1613 aa20.13■□□□□ 0.81
PSMA6-208ENST00000554843 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
PSMA6-208ENST00000554843 MAP2P11137 1827 aaKnown RBP20.12■□□□□ 0.81
PSMA6-208ENST00000554843 HAP1P54257 671 aaPredicted RBP20.12■□□□□ 0.81
PSMA6-208ENST00000554843 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
PSMA6-208ENST00000554843 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 KIAA0232Q92628 1395 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
PSMA6-208ENST00000554843 SOX12O15370 315 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 COL14A1Q05707 1796 aaKnown RBP20.1■□□□□ 0.81
PSMA6-208ENST00000554843 LMO7Q8WWI1 1683 aa20.1■□□□□ 0.81
PSMA6-208ENST00000554843 COL18A1P39060 1754 aa20.09■□□□□ 0.81
PSMA6-208ENST00000554843 PPP2R1AP30153 589 aa20.09■□□□□ 0.81
PSMA6-208ENST00000554843 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
PSMA6-208ENST00000554843 FLT4P35916 1363 aa20.08■□□□□ 0.81
PSMA6-208ENST00000554843 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
PSMA6-208ENST00000554843 POLKQ9UBT6 870 aa20.08■□□□□ 0.81
PSMA6-208ENST00000554843 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
PSMA6-208ENST00000554843 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
PSMA6-208ENST00000554843 FBLN1P23142 703 aa20.06■□□□□ 0.8
PSMA6-208ENST00000554843 PRDM11Q9NQV5 511 aa20.06■□□□□ 0.8
PSMA6-208ENST00000554843 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
PSMA6-208ENST00000554843 PLCH1Q4KWH8 1693 aa20.06■□□□□ 0.8
PSMA6-208ENST00000554843 NUTM2BA6NNL0 878 aaPredicted RBP20.05■□□□□ 0.8
PSMA6-208ENST00000554843 NUTM2EB1AL46 878 aaPredicted RBP20.05■□□□□ 0.8
PSMA6-208ENST00000554843 NUTM2AQ8IVF1 878 aaPredicted RBP20.05■□□□□ 0.8
PSMA6-208ENST00000554843 INSRP06213 1382 aa20.05■□□□□ 0.8
PSMA6-208ENST00000554843 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
PSMA6-208ENST00000554843 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms