RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
RIPK3-204ENST00000554756 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
RIPK3-204ENST00000554756 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
RIPK3-204ENST00000554756 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
RIPK3-204ENST00000554756 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
RIPK3-204ENST00000554756 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
RIPK3-204ENST00000554756 USP6P35125 1406 aa16.79■□□□□ 0.28
RIPK3-204ENST00000554756 MEX3CQ5U5Q3 659 aaKnown RBP16.79■□□□□ 0.28
RIPK3-204ENST00000554756 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
RIPK3-204ENST00000554756 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
RIPK3-204ENST00000554756 LRP6O75581 1613 aa16.78■□□□□ 0.28
RIPK3-204ENST00000554756 TRPM3Q9HCF6 1732 aaPredicted RBP16.78■□□□□ 0.28
RIPK3-204ENST00000554756 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
RIPK3-204ENST00000554756 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
RIPK3-204ENST00000554756 TERF2IPQ9NYB0 399 aa16.78■□□□□ 0.28
RIPK3-204ENST00000554756 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.27
RIPK3-204ENST00000554756 ABTB2Q8N961 1025 aa16.77■□□□□ 0.27
RIPK3-204ENST00000554756 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
RIPK3-204ENST00000554756 NINLQ9Y2I6 1382 aa16.76■□□□□ 0.27
RIPK3-204ENST00000554756 TTC21BQ7Z4L5 1316 aa16.75■□□□□ 0.27
RIPK3-204ENST00000554756 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
RIPK3-204ENST00000554756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
RIPK3-204ENST00000554756 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
RIPK3-204ENST00000554756 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
RIPK3-204ENST00000554756 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
RIPK3-204ENST00000554756 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
RIPK3-204ENST00000554756 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
RIPK3-204ENST00000554756 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
RIPK3-204ENST00000554756 NLRP6P59044 892 aa16.72■□□□□ 0.27
RIPK3-204ENST00000554756 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
RIPK3-204ENST00000554756 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
RIPK3-204ENST00000554756 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
RIPK3-204ENST00000554756 NME9Q86XW9 330 aa16.71■□□□□ 0.27
RIPK3-204ENST00000554756 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
RIPK3-204ENST00000554756 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.26
RIPK3-204ENST00000554756 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
RIPK3-204ENST00000554756 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
RIPK3-204ENST00000554756 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
RIPK3-204ENST00000554756 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
RIPK3-204ENST00000554756 MYOM1P52179 1685 aa16.68■□□□□ 0.26
RIPK3-204ENST00000554756 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
RIPK3-204ENST00000554756 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
RIPK3-204ENST00000554756 USP19O94966 1318 aa16.66■□□□□ 0.26
RIPK3-204ENST00000554756 AFF2P51816 1311 aa16.66■□□□□ 0.26
RIPK3-204ENST00000554756 SOX12O15370 315 aa16.66■□□□□ 0.26
RIPK3-204ENST00000554756 ZC3H6P61129 1189 aaKnown RBP16.66■□□□□ 0.26
RIPK3-204ENST00000554756 PANK3Q9H999 370 aa16.66■□□□□ 0.26
RIPK3-204ENST00000554756 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
RIPK3-204ENST00000554756 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
RIPK3-204ENST00000554756 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
RIPK3-204ENST00000554756 GCP02774 474 aa16.65■□□□□ 0.26
RIPK3-204ENST00000554756 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
RIPK3-204ENST00000554756 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
RIPK3-204ENST00000554756 FAM83GA6ND36 823 aa16.64■□□□□ 0.25
RIPK3-204ENST00000554756 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
RIPK3-204ENST00000554756 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
RIPK3-204ENST00000554756 GGNBP2Q9H3C7 697 aa16.63■□□□□ 0.25
RIPK3-204ENST00000554756 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
RIPK3-204ENST00000554756 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
RIPK3-204ENST00000554756 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
RIPK3-204ENST00000554756 CRYBG1Q9Y4K1 1723 aa16.62■□□□□ 0.25
RIPK3-204ENST00000554756 FYB1O15117 783 aa16.62■□□□□ 0.25
RIPK3-204ENST00000554756 USP21Q9UK80 565 aa16.62■□□□□ 0.25
RIPK3-204ENST00000554756 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
RIPK3-204ENST00000554756 ZNF772Q68DY9 489 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-204ENST00000554756 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-204ENST00000554756 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
RIPK3-204ENST00000554756 COG3Q96JB2 828 aa16.61■□□□□ 0.25
RIPK3-204ENST00000554756 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
RIPK3-204ENST00000554756 SLIT3O75094 1523 aa16.6■□□□□ 0.25
RIPK3-204ENST00000554756 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
RIPK3-204ENST00000554756 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
RIPK3-204ENST00000554756 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
RIPK3-204ENST00000554756 CGNL1Q0VF96 1302 aa16.58■□□□□ 0.25
RIPK3-204ENST00000554756 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
RIPK3-204ENST00000554756 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.24
RIPK3-204ENST00000554756 MARF1Q9Y4F3 1742 aaKnown RBP16.58■□□□□ 0.24
RIPK3-204ENST00000554756 SLIT2O94813 1529 aa16.57■□□□□ 0.24
RIPK3-204ENST00000554756 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
RIPK3-204ENST00000554756 CPDO75976 1380 aa16.57■□□□□ 0.24
RIPK3-204ENST00000554756 FBLN1P23142 703 aa16.56■□□□□ 0.24
RIPK3-204ENST00000554756 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
RIPK3-204ENST00000554756 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
RIPK3-204ENST00000554756 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
RIPK3-204ENST00000554756 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
RIPK3-204ENST00000554756 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
RIPK3-204ENST00000554756 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
RIPK3-204ENST00000554756 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
RIPK3-204ENST00000554756 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
RIPK3-204ENST00000554756 NFAT5O94916 1531 aa16.54■□□□□ 0.24
RIPK3-204ENST00000554756 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
RIPK3-204ENST00000554756 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
RIPK3-204ENST00000554756 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
RIPK3-204ENST00000554756 EVA1CP58658 441 aa16.53■□□□□ 0.24
RIPK3-204ENST00000554756 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
RIPK3-204ENST00000554756 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
RIPK3-204ENST00000554756 RXRBP28702 533 aa16.52■□□□□ 0.24
RIPK3-204ENST00000554756 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.23
RIPK3-204ENST00000554756 ATRNO75882 1429 aa16.52■□□□□ 0.23
RIPK3-204ENST00000554756 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms