RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
VTI1B-204ENST00000554659 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
VTI1B-204ENST00000554659 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
VTI1B-204ENST00000554659 NAP1L1P55209 391 aaKnown RBP16.72■□□□□ 0.27
VTI1B-204ENST00000554659 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
VTI1B-204ENST00000554659 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
VTI1B-204ENST00000554659 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
VTI1B-204ENST00000554659 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
VTI1B-204ENST00000554659 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
VTI1B-204ENST00000554659 GNAI2P04899 355 aa16.71■□□□□ 0.27
VTI1B-204ENST00000554659 RAPGEF4Q8WZA2 1011 aa16.71■□□□□ 0.27
VTI1B-204ENST00000554659 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 H0YHG0 523 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 KINO60870 393 aaKnown RBP16.7■□□□□ 0.26
VTI1B-204ENST00000554659 WASHC4Q2M389 1173 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
VTI1B-204ENST00000554659 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
VTI1B-204ENST00000554659 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
VTI1B-204ENST00000554659 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
VTI1B-204ENST00000554659 C1orf115Q9H7X2 142 aa16.69■□□□□ 0.26
VTI1B-204ENST00000554659 CCP110O43303 1012 aa16.69■□□□□ 0.26
VTI1B-204ENST00000554659 RAD21O60216 631 aa16.69■□□□□ 0.26
VTI1B-204ENST00000554659 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
VTI1B-204ENST00000554659 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
VTI1B-204ENST00000554659 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
VTI1B-204ENST00000554659 XBP1P17861 261 aa16.68■□□□□ 0.26
VTI1B-204ENST00000554659 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
VTI1B-204ENST00000554659 CWC15Q9P013 229 aaKnown RBP16.68■□□□□ 0.26
VTI1B-204ENST00000554659 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
VTI1B-204ENST00000554659 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
VTI1B-204ENST00000554659 AEBP1Q8IUX7 1158 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 FIBPO43427 364 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
VTI1B-204ENST00000554659 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
VTI1B-204ENST00000554659 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 DHX8Q14562 1220 aaKnown RBP16.67■□□□□ 0.26
VTI1B-204ENST00000554659 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
VTI1B-204ENST00000554659 MCM4P33991 863 aa16.66■□□□□ 0.26
VTI1B-204ENST00000554659 PDILTQ8N807 584 aa16.66■□□□□ 0.26
VTI1B-204ENST00000554659 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
VTI1B-204ENST00000554659 ERCC4Q92889 916 aaPredicted RBP16.65■□□□□ 0.26
VTI1B-204ENST00000554659 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 NLRP6P59044 892 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 HECW1Q76N89 1606 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 DAPK1P53355 1430 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
VTI1B-204ENST00000554659 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
VTI1B-204ENST00000554659 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
VTI1B-204ENST00000554659 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
VTI1B-204ENST00000554659 SMC2O95347 1197 aa16.64■□□□□ 0.25
VTI1B-204ENST00000554659 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
VTI1B-204ENST00000554659 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
VTI1B-204ENST00000554659 RBM10P98175 930 aaKnown RBP16.63■□□□□ 0.25
VTI1B-204ENST00000554659 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 CT47A1Q5JQC4 288 aaPredicted RBP16.63■□□□□ 0.25
VTI1B-204ENST00000554659 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 SART3Q15020 963 aaKnown RBP16.63■□□□□ 0.25
VTI1B-204ENST00000554659 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 DCTN1Q14203 1278 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
VTI1B-204ENST00000554659 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
VTI1B-204ENST00000554659 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
VTI1B-204ENST00000554659 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
VTI1B-204ENST00000554659 OFD1O75665 1012 aa16.61■□□□□ 0.25
VTI1B-204ENST00000554659 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
VTI1B-204ENST00000554659 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
VTI1B-204ENST00000554659 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
VTI1B-204ENST00000554659 KRT85P78386 507 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 STK38Q15208 465 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 FILIP1LQ4L180 1135 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 SMARCE1Q969G3 411 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 NAIPQ13075 1403 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 ESPNB1AK53 854 aa16.6■□□□□ 0.25
VTI1B-204ENST00000554659 TSPYL1Q9H0U9 437 aa16.59■□□□□ 0.25
VTI1B-204ENST00000554659 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
VTI1B-204ENST00000554659 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
VTI1B-204ENST00000554659 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
VTI1B-204ENST00000554659 ODF2Q5BJF6 829 aa16.58■□□□□ 0.25
VTI1B-204ENST00000554659 SPC24Q8NBT2 197 aa16.58■□□□□ 0.25
VTI1B-204ENST00000554659 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.25
VTI1B-204ENST00000554659 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
VTI1B-204ENST00000554659 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
VTI1B-204ENST00000554659 PDIA4P13667 645 aaKnown RBP16.57■□□□□ 0.24
VTI1B-204ENST00000554659 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
VTI1B-204ENST00000554659 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
VTI1B-204ENST00000554659 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms