RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PSME1Q06323 249 aa10.8□□□□□ -0.68
LINC00640-201ENST00000554409 AFF2P51816 1311 aa10.8□□□□□ -0.68
LINC00640-201ENST00000554409 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
LINC00640-201ENST00000554409 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
LINC00640-201ENST00000554409 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.79□□□□□ -0.68
LINC00640-201ENST00000554409 CRYBG1Q9Y4K1 1723 aa10.79□□□□□ -0.68
LINC00640-201ENST00000554409 NBPF8Q3BBV2 869 aa10.78□□□□□ -0.68
LINC00640-201ENST00000554409 PMFBP1Q8TBY8 1022 aa10.78□□□□□ -0.68
LINC00640-201ENST00000554409 CDK19Q9BWU1 502 aa10.78□□□□□ -0.68
LINC00640-201ENST00000554409 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
LINC00640-201ENST00000554409 POLR3AO14802 1390 aaPredicted RBP10.77□□□□□ -0.68
LINC00640-201ENST00000554409 NUDT16Q96DE0 195 aaKnown RBP10.77□□□□□ -0.69
LINC00640-201ENST00000554409 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
LINC00640-201ENST00000554409 ADAMTS2O95450 1211 aa10.76□□□□□ -0.69
LINC00640-201ENST00000554409 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
LINC00640-201ENST00000554409 SBNO2Q9Y2G9 1366 aa10.76□□□□□ -0.69
LINC00640-201ENST00000554409 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
LINC00640-201ENST00000554409 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
LINC00640-201ENST00000554409 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
LINC00640-201ENST00000554409 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
LINC00640-201ENST00000554409 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
LINC00640-201ENST00000554409 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
LINC00640-201ENST00000554409 CLSPNQ9HAW4 1339 aa10.75□□□□□ -0.69
LINC00640-201ENST00000554409 SLIT2O94813 1529 aa10.74□□□□□ -0.69
LINC00640-201ENST00000554409 PHRF1Q9P1Y6 1649 aaKnown RBP10.74□□□□□ -0.69
LINC00640-201ENST00000554409 RXRBP28702 533 aa10.74□□□□□ -0.69
LINC00640-201ENST00000554409 ATRNO75882 1429 aa10.74□□□□□ -0.69
LINC00640-201ENST00000554409 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
LINC00640-201ENST00000554409 BCL9LQ86UU0 1499 aa10.74□□□□□ -0.69
LINC00640-201ENST00000554409 SRPK2P78362 688 aaKnown RBP10.73□□□□□ -0.69
LINC00640-201ENST00000554409 USP21Q9UK80 565 aa10.73□□□□□ -0.69
LINC00640-201ENST00000554409 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
LINC00640-201ENST00000554409 BRD4O60885 1362 aaPredicted RBP10.73□□□□□ -0.69
LINC00640-201ENST00000554409 AKAP12Q02952 1782 aa10.72□□□□□ -0.69
LINC00640-201ENST00000554409 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
LINC00640-201ENST00000554409 QTRT2Q9H974 415 aaKnown RBP10.72□□□□□ -0.69
LINC00640-201ENST00000554409 ACEP12821 1306 aa10.72□□□□□ -0.69
LINC00640-201ENST00000554409 NRAPQ86VF7 1730 aa10.72□□□□□ -0.69
LINC00640-201ENST00000554409 RGS12O14924 1447 aa10.71□□□□□ -0.69
LINC00640-201ENST00000554409 RBM6P78332 1123 aaKnown RBP10.71□□□□□ -0.69
LINC00640-201ENST00000554409 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
LINC00640-201ENST00000554409 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
LINC00640-201ENST00000554409 CABLES1Q8TDN4 633 aa10.71□□□□□ -0.69
LINC00640-201ENST00000554409 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.69
LINC00640-201ENST00000554409 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
LINC00640-201ENST00000554409 TRPC5Q9UL62 973 aaPredicted RBP10.71□□□□□ -0.69
LINC00640-201ENST00000554409 NRKQ7Z2Y5 1582 aa10.7□□□□□ -0.7
LINC00640-201ENST00000554409 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
LINC00640-201ENST00000554409 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
LINC00640-201ENST00000554409 GLI3P10071 1580 aa10.69□□□□□ -0.7
LINC00640-201ENST00000554409 USP6P35125 1406 aa10.69□□□□□ -0.7
LINC00640-201ENST00000554409 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
LINC00640-201ENST00000554409 HAP1P54257 671 aaPredicted RBP10.69□□□□□ -0.7
LINC00640-201ENST00000554409 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
LINC00640-201ENST00000554409 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
LINC00640-201ENST00000554409 UNC5CLQ8IV45 518 aa10.68□□□□□ -0.7
LINC00640-201ENST00000554409 SSH2Q76I76 1423 aa10.67□□□□□ -0.7
LINC00640-201ENST00000554409 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
LINC00640-201ENST00000554409 USP19O94966 1318 aa10.67□□□□□ -0.7
LINC00640-201ENST00000554409 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
LINC00640-201ENST00000554409 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
LINC00640-201ENST00000554409 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 FAM83GA6ND36 823 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 GJD4Q96KN9 370 aaPredicted RBP10.66□□□□□ -0.7
LINC00640-201ENST00000554409 SLIT3O75094 1523 aa10.66□□□□□ -0.7
LINC00640-201ENST00000554409 VPS72Q15906 364 aa10.65□□□□□ -0.7
LINC00640-201ENST00000554409 PUS7Q96PZ0 661 aaKnown RBP10.65□□□□□ -0.7
LINC00640-201ENST00000554409 LMO7Q8WWI1 1683 aa10.65□□□□□ -0.7
LINC00640-201ENST00000554409 CD163L1Q9NR16 1453 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 ABTB2Q8N961 1025 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 TESK2Q96S53 571 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
LINC00640-201ENST00000554409 CPDO75976 1380 aa10.64□□□□□ -0.71
LINC00640-201ENST00000554409 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
LINC00640-201ENST00000554409 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
LINC00640-201ENST00000554409 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
LINC00640-201ENST00000554409 USP47Q96K76 1375 aa10.63□□□□□ -0.71
LINC00640-201ENST00000554409 NINLQ9Y2I6 1382 aa10.63□□□□□ -0.71
LINC00640-201ENST00000554409 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
LINC00640-201ENST00000554409 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
LINC00640-201ENST00000554409 NUTM2GQ5VZR2 741 aa10.62□□□□□ -0.71
LINC00640-201ENST00000554409 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00640-201ENST00000554409 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
LINC00640-201ENST00000554409 BTG4Q9NY30 223 aa10.62□□□□□ -0.71
LINC00640-201ENST00000554409 KTN1Q86UP2 1357 aaKnown RBP10.62□□□□□ -0.71
LINC00640-201ENST00000554409 THSD7AQ9UPZ6 1657 aa10.61□□□□□ -0.71
LINC00640-201ENST00000554409 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
LINC00640-201ENST00000554409 COL18A1P39060 1754 aa10.61□□□□□ -0.71
LINC00640-201ENST00000554409 TTC21BQ7Z4L5 1316 aa10.6□□□□□ -0.71
LINC00640-201ENST00000554409 CAMTA1Q9Y6Y1 1673 aa10.6□□□□□ -0.71
LINC00640-201ENST00000554409 GCP02774 474 aa10.6□□□□□ -0.71
LINC00640-201ENST00000554409 NLRP6P59044 892 aa10.6□□□□□ -0.71
LINC00640-201ENST00000554409 ZC3H6P61129 1189 aaKnown RBP10.6□□□□□ -0.71
LINC00640-201ENST00000554409 EDC4Q6P2E9 1401 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms