RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
PTCD2P1-201ENST00000554393 GPRASP1Q5JY77 1395 aa14.97□□□□□ -0.01
PTCD2P1-201ENST00000554393 CENPJQ9HC77 1338 aaPredicted RBP14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 CAPN15O75808 1086 aa14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 PMFBP1Q8TBY8 1022 aa14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
PTCD2P1-201ENST00000554393 RBM6P78332 1123 aaKnown RBP14.94□□□□□ -0.02
PTCD2P1-201ENST00000554393 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
PTCD2P1-201ENST00000554393 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
PTCD2P1-201ENST00000554393 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
PTCD2P1-201ENST00000554393 ATRNO75882 1429 aa14.93□□□□□ -0.02
PTCD2P1-201ENST00000554393 CDK19Q9BWU1 502 aa14.93□□□□□ -0.02
PTCD2P1-201ENST00000554393 USP21Q9UK80 565 aa14.93□□□□□ -0.02
PTCD2P1-201ENST00000554393 BCL9LQ86UU0 1499 aa14.93□□□□□ -0.02
PTCD2P1-201ENST00000554393 PLCH1Q4KWH8 1693 aa14.93□□□□□ -0.02
PTCD2P1-201ENST00000554393 SLIT2O94813 1529 aa14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 TRPC5Q9UL62 973 aaPredicted RBP14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 POLR3AO14802 1390 aaPredicted RBP14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 RGS12O14924 1447 aa14.92□□□□□ -0.02
PTCD2P1-201ENST00000554393 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
PTCD2P1-201ENST00000554393 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
PTCD2P1-201ENST00000554393 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
PTCD2P1-201ENST00000554393 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
PTCD2P1-201ENST00000554393 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
PTCD2P1-201ENST00000554393 COL14A1Q05707 1796 aaKnown RBP14.88□□□□□ -0.03
PTCD2P1-201ENST00000554393 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
PTCD2P1-201ENST00000554393 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
PTCD2P1-201ENST00000554393 NRAPQ86VF7 1730 aa14.87□□□□□ -0.03
PTCD2P1-201ENST00000554393 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
PTCD2P1-201ENST00000554393 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
PTCD2P1-201ENST00000554393 BRD4O60885 1362 aaPredicted RBP14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 SBNO2Q9Y2G9 1366 aa14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 SRPK2P78362 688 aaKnown RBP14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 UNC5CLQ8IV45 518 aa14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 ACEP12821 1306 aa14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 EVC2Q86UK5 1308 aa14.86□□□□□ -0.03
PTCD2P1-201ENST00000554393 GLI3P10071 1580 aa14.85□□□□□ -0.03
PTCD2P1-201ENST00000554393 AKAP12Q02952 1782 aa14.84□□□□□ -0.03
PTCD2P1-201ENST00000554393 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
PTCD2P1-201ENST00000554393 IFFO2Q5TF58 517 aa14.84□□□□□ -0.03
PTCD2P1-201ENST00000554393 GJD4Q96KN9 370 aaPredicted RBP14.83□□□□□ -0.04
PTCD2P1-201ENST00000554393 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
PTCD2P1-201ENST00000554393 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.04
PTCD2P1-201ENST00000554393 NRKQ7Z2Y5 1582 aa14.81□□□□□ -0.04
PTCD2P1-201ENST00000554393 EP400Q96L91 3159 aa14.81□□□□□ -0.04
PTCD2P1-201ENST00000554393 VPS72Q15906 364 aa14.81□□□□□ -0.04
PTCD2P1-201ENST00000554393 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
PTCD2P1-201ENST00000554393 USP6P35125 1406 aa14.81□□□□□ -0.04
PTCD2P1-201ENST00000554393 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
PTCD2P1-201ENST00000554393 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
PTCD2P1-201ENST00000554393 LRP5O75197 1615 aa14.79□□□□□ -0.04
PTCD2P1-201ENST00000554393 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
PTCD2P1-201ENST00000554393 CLSPNQ9HAW4 1339 aa14.79□□□□□ -0.04
PTCD2P1-201ENST00000554393 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
PTCD2P1-201ENST00000554393 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
PTCD2P1-201ENST00000554393 SSH2Q76I76 1423 aa14.78□□□□□ -0.04
PTCD2P1-201ENST00000554393 USP19O94966 1318 aa14.78□□□□□ -0.04
PTCD2P1-201ENST00000554393 CABP1Q9NZU7 370 aa14.78□□□□□ -0.04
PTCD2P1-201ENST00000554393 ABTB2Q8N961 1025 aa14.77□□□□□ -0.05
PTCD2P1-201ENST00000554393 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
PTCD2P1-201ENST00000554393 SLIT3O75094 1523 aa14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 CPDO75976 1380 aa14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 KIAA0232Q92628 1395 aa14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 BTG4Q9NY30 223 aa14.76□□□□□ -0.05
PTCD2P1-201ENST00000554393 CPSF1Q10570 1443 aaKnown RBP14.75□□□□□ -0.05
PTCD2P1-201ENST00000554393 ONECUT3O60422 494 aaPredicted RBP14.75□□□□□ -0.05
PTCD2P1-201ENST00000554393 NLRP13Q86W25 1043 aa14.75□□□□□ -0.05
PTCD2P1-201ENST00000554393 PUS7Q96PZ0 661 aaKnown RBP14.74□□□□□ -0.05
PTCD2P1-201ENST00000554393 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
PTCD2P1-201ENST00000554393 USP54Q70EL1 1684 aa14.74□□□□□ -0.05
PTCD2P1-201ENST00000554393 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
PTCD2P1-201ENST00000554393 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
PTCD2P1-201ENST00000554393 CCDC9Q9Y3X0 531 aaKnown RBP14.73□□□□□ -0.05
PTCD2P1-201ENST00000554393 THSD7AQ9UPZ6 1657 aa14.73□□□□□ -0.05
PTCD2P1-201ENST00000554393 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
PTCD2P1-201ENST00000554393 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 GCP02774 474 aa14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 DSG3P32926 999 aa14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 ZC3H6P61129 1189 aaKnown RBP14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 SEPT12Q8IYM1 358 aa14.71□□□□□ -0.05
PTCD2P1-201ENST00000554393 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.06
PTCD2P1-201ENST00000554393 CAMTA1Q9Y6Y1 1673 aa14.71□□□□□ -0.06
PTCD2P1-201ENST00000554393 CD163L1Q9NR16 1453 aa14.7□□□□□ -0.06
PTCD2P1-201ENST00000554393 CCDC125Q86Z20 511 aa14.7□□□□□ -0.06
PTCD2P1-201ENST00000554393 NINLQ9Y2I6 1382 aa14.7□□□□□ -0.06
PTCD2P1-201ENST00000554393 TTC21BQ7Z4L5 1316 aa14.69□□□□□ -0.06
PTCD2P1-201ENST00000554393 NLRP6P59044 892 aa14.69□□□□□ -0.06
PTCD2P1-201ENST00000554393 CHRNA2Q15822 529 aa14.69□□□□□ -0.06
PTCD2P1-201ENST00000554393 COL18A1P39060 1754 aa14.69□□□□□ -0.06
PTCD2P1-201ENST00000554393 TESK2Q96S53 571 aa14.68□□□□□ -0.06
PTCD2P1-201ENST00000554393 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 ABCC6O95255 1503 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms