RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
LINC00520-202ENST00000554196 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
LINC00520-202ENST00000554196 WDR43Q15061 677 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00520-202ENST00000554196 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
LINC00520-202ENST00000554196 STRCQ7RTU9 1775 aa12.28□□□□□ -0.44
LINC00520-202ENST00000554196 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
LINC00520-202ENST00000554196 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
LINC00520-202ENST00000554196 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
LINC00520-202ENST00000554196 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
LINC00520-202ENST00000554196 PRR36Q9H6K5 1346 aa12.27□□□□□ -0.45
LINC00520-202ENST00000554196 USP6P35125 1406 aa12.27□□□□□ -0.45
LINC00520-202ENST00000554196 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.45
LINC00520-202ENST00000554196 PIK3C2AO00443 1686 aa12.26□□□□□ -0.45
LINC00520-202ENST00000554196 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
LINC00520-202ENST00000554196 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
LINC00520-202ENST00000554196 KCNA6P17658 529 aa12.26□□□□□ -0.45
LINC00520-202ENST00000554196 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
LINC00520-202ENST00000554196 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
LINC00520-202ENST00000554196 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
LINC00520-202ENST00000554196 DCCP43146 1447 aa12.24□□□□□ -0.45
LINC00520-202ENST00000554196 AATKQ6ZMQ8 1374 aa12.24□□□□□ -0.45
LINC00520-202ENST00000554196 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
LINC00520-202ENST00000554196 NGEFQ8N5V2 710 aa12.24□□□□□ -0.45
LINC00520-202ENST00000554196 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
LINC00520-202ENST00000554196 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
LINC00520-202ENST00000554196 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
LINC00520-202ENST00000554196 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
LINC00520-202ENST00000554196 FYB1O15117 783 aa12.23□□□□□ -0.45
LINC00520-202ENST00000554196 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
LINC00520-202ENST00000554196 IQSEC2Q5JU85 1478 aa12.22□□□□□ -0.45
LINC00520-202ENST00000554196 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
LINC00520-202ENST00000554196 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
LINC00520-202ENST00000554196 LTN1O94822 1766 aa12.2□□□□□ -0.46
LINC00520-202ENST00000554196 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
LINC00520-202ENST00000554196 ACEP12821 1306 aa12.2□□□□□ -0.46
LINC00520-202ENST00000554196 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
LINC00520-202ENST00000554196 PHRF1Q9P1Y6 1649 aaKnown RBP12.2□□□□□ -0.46
LINC00520-202ENST00000554196 NEFLP07196 543 aa12.2□□□□□ -0.46
LINC00520-202ENST00000554196 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
LINC00520-202ENST00000554196 MTHFSP49914 203 aa12.19□□□□□ -0.46
LINC00520-202ENST00000554196 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
LINC00520-202ENST00000554196 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 COG3Q96JB2 828 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
LINC00520-202ENST00000554196 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
LINC00520-202ENST00000554196 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
LINC00520-202ENST00000554196 KDM4FA0A1W2PPD8 638 aa12.17□□□□□ -0.46
LINC00520-202ENST00000554196 TNNT2P45379 298 aaPredicted RBP12.17□□□□□ -0.46
LINC00520-202ENST00000554196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00520-202ENST00000554196 ALS2Q96Q42 1657 aa12.16□□□□□ -0.46
LINC00520-202ENST00000554196 NME9Q86XW9 330 aa12.15□□□□□ -0.46
LINC00520-202ENST00000554196 NGDNQ8NEJ9 315 aaKnown RBP12.15□□□□□ -0.46
LINC00520-202ENST00000554196 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
LINC00520-202ENST00000554196 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
LINC00520-202ENST00000554196 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
LINC00520-202ENST00000554196 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
LINC00520-202ENST00000554196 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
LINC00520-202ENST00000554196 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
LINC00520-202ENST00000554196 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
LINC00520-202ENST00000554196 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
LINC00520-202ENST00000554196 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
LINC00520-202ENST00000554196 C1orf167Q5SNV9 1468 aa12.12□□□□□ -0.47
LINC00520-202ENST00000554196 MST1RQ04912 1400 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 SLIT3O75094 1523 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 CRYBG1Q9Y4K1 1723 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 NFAT5O94916 1531 aa12.11□□□□□ -0.47
LINC00520-202ENST00000554196 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
LINC00520-202ENST00000554196 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
LINC00520-202ENST00000554196 MSH6P52701 1360 aa12.1□□□□□ -0.47
LINC00520-202ENST00000554196 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
LINC00520-202ENST00000554196 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00520-202ENST00000554196 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
LINC00520-202ENST00000554196 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
LINC00520-202ENST00000554196 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
LINC00520-202ENST00000554196 FLT4P35916 1363 aa12.09□□□□□ -0.47
LINC00520-202ENST00000554196 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
LINC00520-202ENST00000554196 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
LINC00520-202ENST00000554196 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
LINC00520-202ENST00000554196 ABCC6O95255 1503 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 APAF1O14727 1248 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 NEFMP07197 916 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 HSPA2P54652 639 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
LINC00520-202ENST00000554196 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
LINC00520-202ENST00000554196 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
LINC00520-202ENST00000554196 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
LINC00520-202ENST00000554196 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
LINC00520-202ENST00000554196 CAMTA1Q9Y6Y1 1673 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 ARHGEF10O15013 1369 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 E9PSI1 815 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 FCHSD2O94868 740 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms