RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
RDH11-206ENST00000554035 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
RDH11-206ENST00000554035 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
RDH11-206ENST00000554035 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
RDH11-206ENST00000554035 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
RDH11-206ENST00000554035 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
RDH11-206ENST00000554035 POLR3AO14802 1390 aaPredicted RBP12.04□□□□□ -0.48
RDH11-206ENST00000554035 FYB1O15117 783 aa12.03□□□□□ -0.48
RDH11-206ENST00000554035 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
RDH11-206ENST00000554035 NRKQ7Z2Y5 1582 aa12.02□□□□□ -0.49
RDH11-206ENST00000554035 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
RDH11-206ENST00000554035 STRCP1A6NGW2 1772 aa12.02□□□□□ -0.49
RDH11-206ENST00000554035 USP6P35125 1406 aa12.02□□□□□ -0.49
RDH11-206ENST00000554035 DCCP43146 1447 aa12.02□□□□□ -0.49
RDH11-206ENST00000554035 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
RDH11-206ENST00000554035 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
RDH11-206ENST00000554035 ACEP12821 1306 aa12.01□□□□□ -0.49
RDH11-206ENST00000554035 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
RDH11-206ENST00000554035 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
RDH11-206ENST00000554035 TTC21AQ8NDW8 1320 aa11.99□□□□□ -0.49
RDH11-206ENST00000554035 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
RDH11-206ENST00000554035 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
RDH11-206ENST00000554035 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
RDH11-206ENST00000554035 NUTM2FA1L443 756 aa11.98□□□□□ -0.49
RDH11-206ENST00000554035 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
RDH11-206ENST00000554035 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
RDH11-206ENST00000554035 BLMP54132 1417 aaPredicted RBP11.96□□□□□ -0.49
RDH11-206ENST00000554035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.96□□□□□ -0.49
RDH11-206ENST00000554035 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
RDH11-206ENST00000554035 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
RDH11-206ENST00000554035 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
RDH11-206ENST00000554035 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.5
RDH11-206ENST00000554035 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 ABCB7O75027 752 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 NME9Q86XW9 330 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
RDH11-206ENST00000554035 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
RDH11-206ENST00000554035 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
RDH11-206ENST00000554035 MTHFSP49914 203 aa11.94□□□□□ -0.5
RDH11-206ENST00000554035 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
RDH11-206ENST00000554035 COG3Q96JB2 828 aa11.94□□□□□ -0.5
RDH11-206ENST00000554035 MST1RQ04912 1400 aa11.94□□□□□ -0.5
RDH11-206ENST00000554035 MSH6P52701 1360 aa11.93□□□□□ -0.5
RDH11-206ENST00000554035 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
RDH11-206ENST00000554035 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
RDH11-206ENST00000554035 ATF3P18847 181 aa11.93□□□□□ -0.5
RDH11-206ENST00000554035 TNNT2P45379 298 aaPredicted RBP11.93□□□□□ -0.5
RDH11-206ENST00000554035 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
RDH11-206ENST00000554035 ZNF335Q9H4Z2 1342 aaPredicted RBP11.92□□□□□ -0.5
RDH11-206ENST00000554035 SHPRHQ149N8 1683 aa11.92□□□□□ -0.5
RDH11-206ENST00000554035 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
RDH11-206ENST00000554035 ERICH6BQ5W0A0 696 aa11.92□□□□□ -0.5
RDH11-206ENST00000554035 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 NEFLP07196 543 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
RDH11-206ENST00000554035 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
RDH11-206ENST00000554035 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
RDH11-206ENST00000554035 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
RDH11-206ENST00000554035 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
RDH11-206ENST00000554035 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
RDH11-206ENST00000554035 PSME1Q06323 249 aa11.88□□□□□ -0.51
RDH11-206ENST00000554035 MARF1Q9Y4F3 1742 aaKnown RBP11.88□□□□□ -0.51
RDH11-206ENST00000554035 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
RDH11-206ENST00000554035 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
RDH11-206ENST00000554035 TRPM3Q9HCF6 1732 aaPredicted RBP11.87□□□□□ -0.51
RDH11-206ENST00000554035 POTEHQ6S545 545 aa11.87□□□□□ -0.51
RDH11-206ENST00000554035 FKBP8Q14318 412 aa11.86□□□□□ -0.51
RDH11-206ENST00000554035 KIF24Q5T7B8 1368 aa11.86□□□□□ -0.51
RDH11-206ENST00000554035 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
RDH11-206ENST00000554035 FOXO3O43524 673 aa11.85□□□□□ -0.51
RDH11-206ENST00000554035 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
RDH11-206ENST00000554035 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
RDH11-206ENST00000554035 NLRP6P59044 892 aa11.85□□□□□ -0.51
RDH11-206ENST00000554035 KRT28Q7Z3Y7 464 aa11.85□□□□□ -0.51
RDH11-206ENST00000554035 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
RDH11-206ENST00000554035 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
RDH11-206ENST00000554035 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
RDH11-206ENST00000554035 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
RDH11-206ENST00000554035 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
RDH11-206ENST00000554035 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
RDH11-206ENST00000554035 SLIT3O75094 1523 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 FBLN1P23142 703 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 IL13P35225 146 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
RDH11-206ENST00000554035 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
RDH11-206ENST00000554035 SLAIN2Q9P270 581 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 USP19O94966 1318 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
RDH11-206ENST00000554035 NFAT5O94916 1531 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms