RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TIMP2P16035 220 aa7.02□□□□□ -1.29
SRP54-204ENST00000553923 NNTQ13423 1086 aa7.02□□□□□ -1.29
SRP54-204ENST00000553923 MTMR2Q13614 643 aa7.02□□□□□ -1.29
SRP54-204ENST00000553923 BARGINQ6ZT62 677 aa7.02□□□□□ -1.29
SRP54-204ENST00000553923 PLEKHG3A1L390 1219 aa7.01□□□□□ -1.29
SRP54-204ENST00000553923 SPDYE5A6NIY4 337 aa7.01□□□□□ -1.29
SRP54-204ENST00000553923 ZMYND10O75800 440 aa7.01□□□□□ -1.29
SRP54-204ENST00000553923 GJA5P36382 358 aa7.01□□□□□ -1.29
SRP54-204ENST00000553923 MRPL14Q6P1L8 145 aaKnown RBP7.01□□□□□ -1.29
SRP54-204ENST00000553923 LYPD8Q6UX82 237 aa7.01□□□□□ -1.29
SRP54-204ENST00000553923 CDK15Q96Q40 435 aa7□□□□□ -1.29
SRP54-204ENST00000553923 FAM181BA6NEQ2 426 aa6.99□□□□□ -1.29
SRP54-204ENST00000553923 F12P00748 615 aaPredicted RBP6.99□□□□□ -1.29
SRP54-204ENST00000553923 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
SRP54-204ENST00000553923 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
SRP54-204ENST00000553923 CFAP99D6REC4 459 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 ADH1CP00326 375 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 WDR4P57081 412 aaKnown RBP6.98□□□□□ -1.29
SRP54-204ENST00000553923 RSBN1LQ6PCB5 846 aaPredicted RBP6.98□□□□□ -1.29
SRP54-204ENST00000553923 FOXJ1Q92949 421 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 PURBQ96QR8 312 aaKnown RBP6.98□□□□□ -1.29
SRP54-204ENST00000553923 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 TBC1D2Q9BYX2 928 aa6.98□□□□□ -1.29
SRP54-204ENST00000553923 SOBPA7XYQ1 873 aa6.97□□□□□ -1.29
SRP54-204ENST00000553923 SPTLC1O15269 473 aa6.97□□□□□ -1.29
SRP54-204ENST00000553923 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
SRP54-204ENST00000553923 GRM5P41594 1212 aa6.96□□□□□ -1.3
SRP54-204ENST00000553923 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
SRP54-204ENST00000553923 FAM174AQ8TBP5 190 aa6.96□□□□□ -1.3
SRP54-204ENST00000553923 NR3C2P08235 984 aa6.95□□□□□ -1.3
SRP54-204ENST00000553923 HRCP23327 699 aa6.95□□□□□ -1.3
SRP54-204ENST00000553923 SCARF1Q14162 830 aa6.95□□□□□ -1.3
SRP54-204ENST00000553923 ZC3H15Q8WU90 426 aaKnown RBP6.95□□□□□ -1.3
SRP54-204ENST00000553923 ZFAND3Q9H8U3 227 aa6.95□□□□□ -1.3
SRP54-204ENST00000553923 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
SRP54-204ENST00000553923 CTHP32929 405 aa6.94□□□□□ -1.3
SRP54-204ENST00000553923 PARP9Q8IXQ6 854 aa6.94□□□□□ -1.3
SRP54-204ENST00000553923 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
SRP54-204ENST00000553923 PER1O15534 1290 aaPredicted RBP6.93□□□□□ -1.3
SRP54-204ENST00000553923 ZIC2O95409 532 aaPredicted RBP6.93□□□□□ -1.3
SRP54-204ENST00000553923 NR5A1Q13285 461 aa6.93□□□□□ -1.3
SRP54-204ENST00000553923 DIXDC1Q155Q3 683 aa6.93□□□□□ -1.3
SRP54-204ENST00000553923 PRPF38BQ5VTL8 546 aaKnown RBP6.93□□□□□ -1.3
SRP54-204ENST00000553923 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
SRP54-204ENST00000553923 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
SRP54-204ENST00000553923 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 RIC3Q7Z5B4 369 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 SH3RF1Q7Z6J0 888 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 C1QTNF2Q9BXJ5 285 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
SRP54-204ENST00000553923 TRIM66O15016 1216 aa6.9□□□□□ -1.3
SRP54-204ENST00000553923 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
SRP54-204ENST00000553923 GSK3AP49840 483 aa6.9□□□□□ -1.3
SRP54-204ENST00000553923 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
SRP54-204ENST00000553923 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
SRP54-204ENST00000553923 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
SRP54-204ENST00000553923 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
SRP54-204ENST00000553923 TUSC1Q2TAM9 212 aa6.88□□□□□ -1.31
SRP54-204ENST00000553923 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
SRP54-204ENST00000553923 LIMD1Q9UGP4 676 aa6.88□□□□□ -1.31
SRP54-204ENST00000553923 MAN1A2O60476 641 aa6.87□□□□□ -1.31
SRP54-204ENST00000553923 QPCTQ16769 361 aa6.87□□□□□ -1.31
SRP54-204ENST00000553923 SH3BP5LQ7L8J4 393 aa6.87□□□□□ -1.31
SRP54-204ENST00000553923 TRMT44Q8IYL2 757 aaKnown RBP6.87□□□□□ -1.31
SRP54-204ENST00000553923 DNMT3LQ9UJW3 386 aa6.87□□□□□ -1.31
SRP54-204ENST00000553923 MAP4K5Q9Y4K4 846 aa6.87□□□□□ -1.31
SRP54-204ENST00000553923 LILRB3O75022 631 aa6.86□□□□□ -1.31
SRP54-204ENST00000553923 KCNMA1Q12791 1236 aa6.86□□□□□ -1.31
SRP54-204ENST00000553923 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
SRP54-204ENST00000553923 GPR161Q8N6U8 529 aaKnown RBP6.86□□□□□ -1.31
SRP54-204ENST00000553923 BMP2P12643 396 aa6.85□□□□□ -1.31
SRP54-204ENST00000553923 KRT76Q01546 638 aa6.85□□□□□ -1.31
SRP54-204ENST00000553923 AGERQ15109 404 aa6.85□□□□□ -1.31
SRP54-204ENST00000553923 CSPP1Q1MSJ5 1256 aa6.85□□□□□ -1.31
SRP54-204ENST00000553923 ARMC2Q8NEN0 867 aa6.84□□□□□ -1.31
SRP54-204ENST00000553923 AK7Q96M32 723 aa6.84□□□□□ -1.31
SRP54-204ENST00000553923 RTL5Q5HYW3 569 aaPredicted RBP6.83□□□□□ -1.32
SRP54-204ENST00000553923 FSHRP23945 695 aa6.82□□□□□ -1.32
SRP54-204ENST00000553923 TSEN34Q9BSV6 310 aaKnown RBP6.82□□□□□ -1.32
SRP54-204ENST00000553923 UPP2O95045 317 aa6.81□□□□□ -1.32
SRP54-204ENST00000553923 Q6ZVU0 165 aa6.81□□□□□ -1.32
SRP54-204ENST00000553923 VASH1Q7L8A9 365 aaPredicted RBP6.81□□□□□ -1.32
SRP54-204ENST00000553923 EMILIN1Q9Y6C2 1016 aa6.81□□□□□ -1.32
SRP54-204ENST00000553923 NUTM2BA6NNL0 878 aaPredicted RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 NUTM2EB1AL46 878 aaPredicted RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 SUZ12Q15022 739 aaKnown RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 ERFEQ4G0M1 354 aa6.8□□□□□ -1.32
SRP54-204ENST00000553923 NBPF14Q5TI25 921 aa6.8□□□□□ -1.32
SRP54-204ENST00000553923 NUTM2DQ5VT03 806 aaPredicted RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 NUTM2AQ8IVF1 878 aaPredicted RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
SRP54-204ENST00000553923 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
SRP54-204ENST00000553923 TSC1Q92574 1164 aa6.8□□□□□ -1.32
SRP54-204ENST00000553923 TTLL8A6PVC2 850 aa6.79□□□□□ -1.32
SRP54-204ENST00000553923 PTSQ03393 145 aa6.79□□□□□ -1.32
SRP54-204ENST00000553923 PDE4DQ08499 809 aa6.79□□□□□ -1.32
SRP54-204ENST00000553923 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.79□□□□□ -1.32
SRP54-204ENST00000553923 GPKOWQ92917 476 aaPredicted RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms