RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
PCNX4-207ENST00000553898 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
PCNX4-207ENST00000553898 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-207ENST00000553898 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
PCNX4-207ENST00000553898 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
PCNX4-207ENST00000553898 COL22A1Q8NFW1 1626 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-207ENST00000553898 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
PCNX4-207ENST00000553898 ABTB2Q8N961 1025 aa13.66□□□□□ -0.22
PCNX4-207ENST00000553898 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-207ENST00000553898 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
PCNX4-207ENST00000553898 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
PCNX4-207ENST00000553898 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
PCNX4-207ENST00000553898 USP6P35125 1406 aa13.64□□□□□ -0.23
PCNX4-207ENST00000553898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCNX4-207ENST00000553898 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
PCNX4-207ENST00000553898 RGS17Q9UGC6 210 aaPredicted RBP13.63□□□□□ -0.23
PCNX4-207ENST00000553898 TRPM3Q9HCF6 1732 aaPredicted RBP13.63□□□□□ -0.23
PCNX4-207ENST00000553898 AKAP12Q02952 1782 aa13.63□□□□□ -0.23
PCNX4-207ENST00000553898 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
PCNX4-207ENST00000553898 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
PCNX4-207ENST00000553898 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
PCNX4-207ENST00000553898 NLRP6P59044 892 aa13.61□□□□□ -0.23
PCNX4-207ENST00000553898 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
PCNX4-207ENST00000553898 MARF1Q9Y4F3 1742 aaKnown RBP13.61□□□□□ -0.23
PCNX4-207ENST00000553898 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
PCNX4-207ENST00000553898 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
PCNX4-207ENST00000553898 TTC21BQ7Z4L5 1316 aa13.6□□□□□ -0.23
PCNX4-207ENST00000553898 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
PCNX4-207ENST00000553898 ANKRD36BQ8N2N9 1353 aa13.59□□□□□ -0.23
PCNX4-207ENST00000553898 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
PCNX4-207ENST00000553898 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
PCNX4-207ENST00000553898 EDC4Q6P2E9 1401 aaKnown RBP13.59□□□□□ -0.23
PCNX4-207ENST00000553898 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
PCNX4-207ENST00000553898 SOX12O15370 315 aa13.57□□□□□ -0.24
PCNX4-207ENST00000553898 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
PCNX4-207ENST00000553898 AFF2P51816 1311 aa13.57□□□□□ -0.24
PCNX4-207ENST00000553898 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
PCNX4-207ENST00000553898 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
PCNX4-207ENST00000553898 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 COG3Q96JB2 828 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 USP21Q9UK80 565 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
PCNX4-207ENST00000553898 MYOM1P52179 1685 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
PCNX4-207ENST00000553898 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
PCNX4-207ENST00000553898 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
PCNX4-207ENST00000553898 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
PCNX4-207ENST00000553898 NME9Q86XW9 330 aa13.54□□□□□ -0.24
PCNX4-207ENST00000553898 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
PCNX4-207ENST00000553898 GCP02774 474 aa13.53□□□□□ -0.24
PCNX4-207ENST00000553898 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-207ENST00000553898 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
PCNX4-207ENST00000553898 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.25
PCNX4-207ENST00000553898 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
PCNX4-207ENST00000553898 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
PCNX4-207ENST00000553898 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
PCNX4-207ENST00000553898 USP19O94966 1318 aa13.51□□□□□ -0.25
PCNX4-207ENST00000553898 SOCS7O14512 581 aa13.51□□□□□ -0.25
PCNX4-207ENST00000553898 EVA1CP58658 441 aa13.51□□□□□ -0.25
PCNX4-207ENST00000553898 PANK3Q9H999 370 aa13.51□□□□□ -0.25
PCNX4-207ENST00000553898 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
PCNX4-207ENST00000553898 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
PCNX4-207ENST00000553898 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
PCNX4-207ENST00000553898 BTG4Q9NY30 223 aa13.5□□□□□ -0.25
PCNX4-207ENST00000553898 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
PCNX4-207ENST00000553898 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
PCNX4-207ENST00000553898 FAM83GA6ND36 823 aa13.49□□□□□ -0.25
PCNX4-207ENST00000553898 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
PCNX4-207ENST00000553898 A0A0G2JS52 829 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 RXRBP28702 533 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 MYT1Q01538 1121 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
PCNX4-207ENST00000553898 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 SLIT3O75094 1523 aa13.48□□□□□ -0.25
PCNX4-207ENST00000553898 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
PCNX4-207ENST00000553898 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
PCNX4-207ENST00000553898 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
PCNX4-207ENST00000553898 CPDO75976 1380 aa13.46□□□□□ -0.25
PCNX4-207ENST00000553898 FYB1O15117 783 aa13.46□□□□□ -0.25
PCNX4-207ENST00000553898 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.25
PCNX4-207ENST00000553898 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
PCNX4-207ENST00000553898 CARD14Q9BXL6 1004 aa13.46□□□□□ -0.25
PCNX4-207ENST00000553898 AMPHP49418 695 aa13.45□□□□□ -0.26
PCNX4-207ENST00000553898 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
PCNX4-207ENST00000553898 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
PCNX4-207ENST00000553898 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
PCNX4-207ENST00000553898 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
PCNX4-207ENST00000553898 SLIT2O94813 1529 aa13.44□□□□□ -0.26
PCNX4-207ENST00000553898 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
PCNX4-207ENST00000553898 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
PCNX4-207ENST00000553898 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
PCNX4-207ENST00000553898 NSD2O96028 1365 aa13.44□□□□□ -0.26
PCNX4-207ENST00000553898 BCL9LQ86UU0 1499 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms