RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 TERF2IPQ9NYB0 399 aa27.8■■■□□ 2.04
COCH-206ENST00000553772 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
COCH-206ENST00000553772 HDGFL2Q7Z4V5 671 aaPredicted RBP27.79■■■□□ 2.04
COCH-206ENST00000553772 LRP6O75581 1613 aa27.78■■■□□ 2.04
COCH-206ENST00000553772 NRKQ7Z2Y5 1582 aa27.78■■■□□ 2.04
COCH-206ENST00000553772 KTN1Q86UP2 1357 aaKnown RBP27.78■■■□□ 2.04
COCH-206ENST00000553772 LMOD2Q6P5Q4 547 aa27.77■■■□□ 2.04
COCH-206ENST00000553772 MYOM1P52179 1685 aa27.77■■■□□ 2.04
COCH-206ENST00000553772 A0A1W2PP64 1363 aa27.75■■■□□ 2.03
COCH-206ENST00000553772 ANKRD36BQ8N2N9 1353 aa27.75■■■□□ 2.03
COCH-206ENST00000553772 TTC21AQ8NDW8 1320 aa27.74■■■□□ 2.03
COCH-206ENST00000553772 ABCA3Q99758 1704 aa27.74■■■□□ 2.03
COCH-206ENST00000553772 TTC21BQ7Z4L5 1316 aa27.73■■■□□ 2.03
COCH-206ENST00000553772 NUTM2BA6NNL0 878 aaPredicted RBP27.73■■■□□ 2.03
COCH-206ENST00000553772 NUTM2EB1AL46 878 aaPredicted RBP27.73■■■□□ 2.03
COCH-206ENST00000553772 NUTM2AQ8IVF1 878 aaPredicted RBP27.73■■■□□ 2.03
COCH-206ENST00000553772 EDC4Q6P2E9 1401 aaKnown RBP27.73■■■□□ 2.03
COCH-206ENST00000553772 CRYBG1Q9Y4K1 1723 aa27.72■■■□□ 2.03
COCH-206ENST00000553772 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
COCH-206ENST00000553772 MARF1Q9Y4F3 1742 aaKnown RBP27.72■■■□□ 2.03
COCH-206ENST00000553772 C11orf95C9JLR9 678 aaPredicted RBP27.71■■■□□ 2.03
COCH-206ENST00000553772 PIK3C2AO00443 1686 aa27.7■■■□□ 2.02
COCH-206ENST00000553772 NLRP13Q86W25 1043 aa27.68■■■□□ 2.02
COCH-206ENST00000553772 MEX3CQ5U5Q3 659 aaKnown RBP27.67■■■□□ 2.02
COCH-206ENST00000553772 USP19O94966 1318 aa27.67■■■□□ 2.02
COCH-206ENST00000553772 CABLES1Q8TDN4 633 aa27.66■■■□□ 2.02
COCH-206ENST00000553772 PHRF1Q9P1Y6 1649 aaKnown RBP27.66■■■□□ 2.02
COCH-206ENST00000553772 KIF7Q2M1P5 1343 aa27.66■■■□□ 2.02
COCH-206ENST00000553772 USP54Q70EL1 1684 aa27.65■■■□□ 2.02
COCH-206ENST00000553772 ADAMTS2O95450 1211 aa27.64■■■□□ 2.02
COCH-206ENST00000553772 HAP1P54257 671 aaPredicted RBP27.64■■■□□ 2.02
COCH-206ENST00000553772 POLR3GLQ9BT43 218 aa27.64■■■□□ 2.02
COCH-206ENST00000553772 USP31Q70CQ4 1352 aa27.63■■■□□ 2.01
COCH-206ENST00000553772 NLRP6P59044 892 aa27.63■■■□□ 2.01
COCH-206ENST00000553772 NUTM2GQ5VZR2 741 aa27.63■■■□□ 2.01
COCH-206ENST00000553772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.61■■■□□ 2.01
COCH-206ENST00000553772 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
COCH-206ENST00000553772 SLIT3O75094 1523 aa27.61■■■□□ 2.01
COCH-206ENST00000553772 CCDC7Q96M83 1385 aa27.6■■■□□ 2.01
COCH-206ENST00000553772 C8orf37Q96NL8 207 aa27.59■■■□□ 2.01
COCH-206ENST00000553772 PLEKHG5O94827 1062 aa27.57■■■□□ 2
COCH-206ENST00000553772 NME9Q86XW9 330 aa27.57■■■□□ 2
COCH-206ENST00000553772 FNBP4Q8N3X1 1017 aaPredicted RBP27.57■■■□□ 2
COCH-206ENST00000553772 NGLY1Q96IV0 654 aa27.57■■■□□ 2
COCH-206ENST00000553772 CARD14Q9BXL6 1004 aa27.57■■■□□ 2
COCH-206ENST00000553772 WASHC2AQ641Q2 1341 aa27.57■■■□□ 2
COCH-206ENST00000553772 GCP02774 474 aa27.56■■■□□ 2
COCH-206ENST00000553772 RGS17Q9UGC6 210 aaPredicted RBP27.55■■■□□ 2
COCH-206ENST00000553772 OVOS2A0A0J9YW53 1432 aa27.55■■■□□ 2
COCH-206ENST00000553772 OVOS2Q6IE36 1432 aa27.55■■■□□ 2
COCH-206ENST00000553772 CPDO75976 1380 aa27.54■■■□□ 2
COCH-206ENST00000553772 AFF2P51816 1311 aa27.54■■■□□ 2
COCH-206ENST00000553772 COL14A1Q05707 1796 aaKnown RBP27.54■■■□□ 2
COCH-206ENST00000553772 ZNF772Q68DY9 489 aaPredicted RBP27.54■■■□□ 2
COCH-206ENST00000553772 KCNH5Q8NCM2 988 aa27.54■■■□□ 2
COCH-206ENST00000553772 KIF20BQ96Q89 1820 aa27.54■■■□□ 2
COCH-206ENST00000553772 NSD3Q9BZ95 1437 aa27.54■■■□□ 2
COCH-206ENST00000553772 SLIT2O94813 1529 aa27.53■■■□□ 2
COCH-206ENST00000553772 PANK3Q9H999 370 aa27.53■■■□□ 2
COCH-206ENST00000553772 NWD2Q9ULI1 1742 aa27.53■■■□□ 2
COCH-206ENST00000553772 FAM83GA6ND36 823 aa27.51■■□□□ 1.99
COCH-206ENST00000553772 FYB1O15117 783 aa27.51■■□□□ 1.99
COCH-206ENST00000553772 ZRANB1Q9UGI0 708 aa27.51■■□□□ 1.99
COCH-206ENST00000553772 PLCH1Q4KWH8 1693 aa27.51■■□□□ 1.99
COCH-206ENST00000553772 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
COCH-206ENST00000553772 KIAA0232Q92628 1395 aa27.5■■□□□ 1.99
COCH-206ENST00000553772 PRDM11Q9NQV5 511 aa27.49■■□□□ 1.99
COCH-206ENST00000553772 NFAT5O94916 1531 aa27.49■■□□□ 1.99
COCH-206ENST00000553772 CGNL1Q0VF96 1302 aa27.48■■□□□ 1.99
COCH-206ENST00000553772 ZC3H6P61129 1189 aaKnown RBP27.48■■□□□ 1.99
COCH-206ENST00000553772 COG3Q96JB2 828 aa27.48■■□□□ 1.99
COCH-206ENST00000553772 BCL9LQ86UU0 1499 aa27.48■■□□□ 1.99
COCH-206ENST00000553772 USP21Q9UK80 565 aa27.47■■□□□ 1.99
COCH-206ENST00000553772 ARHGEF25Q86VW2 580 aa27.44■■□□□ 1.98
COCH-206ENST00000553772 UNC5CLQ8IV45 518 aa27.44■■□□□ 1.98
COCH-206ENST00000553772 LMO7Q8WWI1 1683 aa27.43■■□□□ 1.98
COCH-206ENST00000553772 GGNBP2Q9H3C7 697 aa27.43■■□□□ 1.98
COCH-206ENST00000553772 NRAPQ86VF7 1730 aa27.43■■□□□ 1.98
COCH-206ENST00000553772 ABCC6O95255 1503 aa27.42■■□□□ 1.98
COCH-206ENST00000553772 ANKRD26Q9UPS8 1709 aa27.42■■□□□ 1.98
COCH-206ENST00000553772 POTEAQ6S8J7 498 aa27.42■■□□□ 1.98
COCH-206ENST00000553772 AATKQ6ZMQ8 1374 aa27.42■■□□□ 1.98
COCH-206ENST00000553772 COL18A1P39060 1754 aa27.41■■□□□ 1.98
COCH-206ENST00000553772 NSD2O96028 1365 aa27.41■■□□□ 1.98
COCH-206ENST00000553772 BTG4Q9NY30 223 aa27.41■■□□□ 1.98
COCH-206ENST00000553772 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
COCH-206ENST00000553772 KNSTRNQ9Y448 316 aa27.41■■□□□ 1.98
COCH-206ENST00000553772 ATRNO75882 1429 aa27.41■■□□□ 1.98
COCH-206ENST00000553772 CHRNA2Q15822 529 aa27.4■■□□□ 1.98
COCH-206ENST00000553772 LTN1O94822 1766 aa27.4■■□□□ 1.98
COCH-206ENST00000553772 PER1O15534 1290 aaPredicted RBP27.39■■□□□ 1.98
COCH-206ENST00000553772 QTRT2Q9H974 415 aaKnown RBP27.39■■□□□ 1.98
COCH-206ENST00000553772 SOX12O15370 315 aa27.38■■□□□ 1.97
COCH-206ENST00000553772 CAMTA1Q9Y6Y1 1673 aa27.37■■□□□ 1.97
COCH-206ENST00000553772 VPS72Q15906 364 aa27.35■■□□□ 1.97
COCH-206ENST00000553772 AMER1Q5JTC6 1135 aaPredicted RBP27.34■■□□□ 1.97
COCH-206ENST00000553772 RBM6P78332 1123 aaKnown RBP27.33■■□□□ 1.97
COCH-206ENST00000553772 NPC1L1Q9UHC9 1359 aa27.33■■□□□ 1.97
COCH-206ENST00000553772 RXRBP28702 533 aa27.32■■□□□ 1.96
COCH-206ENST00000553772 RGPD5Q99666 1765 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms