RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
ATL1-204ENST00000553746 PDE4DQ08499 809 aa10.68□□□□□ -0.7
ATL1-204ENST00000553746 TUSC1Q2TAM9 212 aa10.68□□□□□ -0.7
ATL1-204ENST00000553746 LINC01559Q495D7 138 aa10.68□□□□□ -0.7
ATL1-204ENST00000553746 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
ATL1-204ENST00000553746 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
ATL1-204ENST00000553746 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
ATL1-204ENST00000553746 CTHP32929 405 aa10.66□□□□□ -0.7
ATL1-204ENST00000553746 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
ATL1-204ENST00000553746 TERTO14746 1132 aaKnown RBP10.63□□□□□ -0.71
ATL1-204ENST00000553746 CABLES1Q8TDN4 633 aa10.63□□□□□ -0.71
ATL1-204ENST00000553746 WIPF1O43516 503 aa10.62□□□□□ -0.71
ATL1-204ENST00000553746 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
ATL1-204ENST00000553746 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
ATL1-204ENST00000553746 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
ATL1-204ENST00000553746 TLL2Q9Y6L7 1015 aa10.62□□□□□ -0.71
ATL1-204ENST00000553746 LILRB3O75022 631 aa10.61□□□□□ -0.71
ATL1-204ENST00000553746 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
ATL1-204ENST00000553746 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
ATL1-204ENST00000553746 CSPP1Q1MSJ5 1256 aa10.6□□□□□ -0.71
ATL1-204ENST00000553746 CDK15Q96Q40 435 aa10.6□□□□□ -0.71
ATL1-204ENST00000553746 NNTQ13423 1086 aa10.59□□□□□ -0.71
ATL1-204ENST00000553746 QPCTQ16769 361 aa10.59□□□□□ -0.71
ATL1-204ENST00000553746 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
ATL1-204ENST00000553746 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
ATL1-204ENST00000553746 PER1O15534 1290 aaPredicted RBP10.58□□□□□ -0.72
ATL1-204ENST00000553746 BMP1P13497 986 aa10.58□□□□□ -0.72
ATL1-204ENST00000553746 NUTM2DQ5VT03 806 aaPredicted RBP10.58□□□□□ -0.72
ATL1-204ENST00000553746 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
ATL1-204ENST00000553746 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
ATL1-204ENST00000553746 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
ATL1-204ENST00000553746 ADH1CP00326 375 aa10.57□□□□□ -0.72
ATL1-204ENST00000553746 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
ATL1-204ENST00000553746 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
ATL1-204ENST00000553746 BPHLQ86WA6 291 aaPredicted RBP10.56□□□□□ -0.72
ATL1-204ENST00000553746 NPAS3Q8IXF0 933 aa10.56□□□□□ -0.72
ATL1-204ENST00000553746 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
ATL1-204ENST00000553746 TIMP2P16035 220 aa10.55□□□□□ -0.72
ATL1-204ENST00000553746 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
ATL1-204ENST00000553746 CLK2P49760 499 aaKnown RBP10.54□□□□□ -0.72
ATL1-204ENST00000553746 INSM1Q01101 510 aaPredicted RBP10.54□□□□□ -0.72
ATL1-204ENST00000553746 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
ATL1-204ENST00000553746 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
ATL1-204ENST00000553746 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
ATL1-204ENST00000553746 NR5A1Q13285 461 aa10.53□□□□□ -0.72
ATL1-204ENST00000553746 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
ATL1-204ENST00000553746 HELBQ8NG08 1087 aaPredicted RBP10.53□□□□□ -0.72
ATL1-204ENST00000553746 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
ATL1-204ENST00000553746 TSC1Q92574 1164 aa10.53□□□□□ -0.72
ATL1-204ENST00000553746 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
ATL1-204ENST00000553746 GRM5P41594 1212 aa10.51□□□□□ -0.73
ATL1-204ENST00000553746 SCARF1Q14162 830 aa10.51□□□□□ -0.73
ATL1-204ENST00000553746 AGERQ15109 404 aa10.51□□□□□ -0.73
ATL1-204ENST00000553746 STK17AQ9UEE5 414 aa10.51□□□□□ -0.73
ATL1-204ENST00000553746 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
ATL1-204ENST00000553746 NBPF14Q5TI25 921 aa10.5□□□□□ -0.73
ATL1-204ENST00000553746 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
ATL1-204ENST00000553746 C1QTNF2Q9BXJ5 285 aa10.5□□□□□ -0.73
ATL1-204ENST00000553746 POLR3EQ9NVU0 708 aa10.49□□□□□ -0.73
ATL1-204ENST00000553746 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
ATL1-204ENST00000553746 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
ATL1-204ENST00000553746 NR3C2P08235 984 aa10.47□□□□□ -0.73
ATL1-204ENST00000553746 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
ATL1-204ENST00000553746 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
ATL1-204ENST00000553746 H3BM21 787 aa10.46□□□□□ -0.73
ATL1-204ENST00000553746 ZIC2O95409 532 aaPredicted RBP10.46□□□□□ -0.73
ATL1-204ENST00000553746 ITPKCQ96DU7 683 aa10.46□□□□□ -0.73
ATL1-204ENST00000553746 PURBQ96QR8 312 aaKnown RBP10.46□□□□□ -0.73
ATL1-204ENST00000553746 SKIV2LQ15477 1246 aaKnown RBP10.45□□□□□ -0.74
ATL1-204ENST00000553746 IRF7Q92985 503 aa10.45□□□□□ -0.74
ATL1-204ENST00000553746 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
ATL1-204ENST00000553746 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
ATL1-204ENST00000553746 SH3D19Q5HYK7 790 aa10.42□□□□□ -0.74
ATL1-204ENST00000553746 GMPRP36959 345 aa10.41□□□□□ -0.74
ATL1-204ENST00000553746 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
ATL1-204ENST00000553746 VASH1Q7L8A9 365 aaPredicted RBP10.41□□□□□ -0.74
ATL1-204ENST00000553746 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
ATL1-204ENST00000553746 PPP2R2DQ66LE6 453 aa10.4□□□□□ -0.74
ATL1-204ENST00000553746 MEIOBQ8N635 442 aa10.4□□□□□ -0.74
ATL1-204ENST00000553746 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATL1-204ENST00000553746 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
ATL1-204ENST00000553746 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
ATL1-204ENST00000553746 FSHRP23945 695 aa10.39□□□□□ -0.75
ATL1-204ENST00000553746 VEGFBP49765 207 aa10.39□□□□□ -0.75
ATL1-204ENST00000553746 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
ATL1-204ENST00000553746 UPP2O95045 317 aa10.38□□□□□ -0.75
ATL1-204ENST00000553746 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
ATL1-204ENST00000553746 PROCA1Q8NCQ7 364 aaPredicted RBP10.38□□□□□ -0.75
ATL1-204ENST00000553746 FKBPLQ9UIM3 349 aa10.38□□□□□ -0.75
ATL1-204ENST00000553746 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
ATL1-204ENST00000553746 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
ATL1-204ENST00000553746 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
ATL1-204ENST00000553746 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
ATL1-204ENST00000553746 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
ATL1-204ENST00000553746 FAM117AQ9C073 453 aa10.37□□□□□ -0.75
ATL1-204ENST00000553746 MAN1A2O60476 641 aa10.36□□□□□ -0.75
ATL1-204ENST00000553746 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
ATL1-204ENST00000553746 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
ATL1-204ENST00000553746 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
ATL1-204ENST00000553746 CDV3Q9UKY7 258 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms