RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 KRT28Q7Z3Y7 464 aa11.19□□□□□ -0.62
SNRPN-206ENST00000553597 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
SNRPN-206ENST00000553597 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
SNRPN-206ENST00000553597 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
SNRPN-206ENST00000553597 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
SNRPN-206ENST00000553597 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
SNRPN-206ENST00000553597 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
SNRPN-206ENST00000553597 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
SNRPN-206ENST00000553597 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
SNRPN-206ENST00000553597 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
SNRPN-206ENST00000553597 USP6P35125 1406 aa11.17□□□□□ -0.62
SNRPN-206ENST00000553597 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
SNRPN-206ENST00000553597 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
SNRPN-206ENST00000553597 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
SNRPN-206ENST00000553597 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
SNRPN-206ENST00000553597 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
SNRPN-206ENST00000553597 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
SNRPN-206ENST00000553597 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
SNRPN-206ENST00000553597 JCADQ9P266 1359 aa11.15□□□□□ -0.63
SNRPN-206ENST00000553597 KIF7Q2M1P5 1343 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 LRP6O75581 1613 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 PLEKHG3A1L390 1219 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
SNRPN-206ENST00000553597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNRPN-206ENST00000553597 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
SNRPN-206ENST00000553597 LTN1O94822 1766 aa11.13□□□□□ -0.63
SNRPN-206ENST00000553597 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
SNRPN-206ENST00000553597 CPSF1Q10570 1443 aaKnown RBP11.13□□□□□ -0.63
SNRPN-206ENST00000553597 CABLES1Q8TDN4 633 aa11.13□□□□□ -0.63
SNRPN-206ENST00000553597 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
SNRPN-206ENST00000553597 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
SNRPN-206ENST00000553597 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
SNRPN-206ENST00000553597 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
SNRPN-206ENST00000553597 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 SOX12O15370 315 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
SNRPN-206ENST00000553597 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
SNRPN-206ENST00000553597 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
SNRPN-206ENST00000553597 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
SNRPN-206ENST00000553597 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
SNRPN-206ENST00000553597 NME9Q86XW9 330 aa11.1□□□□□ -0.63
SNRPN-206ENST00000553597 ABTB2Q8N961 1025 aa11.1□□□□□ -0.63
SNRPN-206ENST00000553597 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
SNRPN-206ENST00000553597 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
SNRPN-206ENST00000553597 SOCS7O14512 581 aa11.09□□□□□ -0.63
SNRPN-206ENST00000553597 PUS7Q96PZ0 661 aaKnown RBP11.09□□□□□ -0.63
SNRPN-206ENST00000553597 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
SNRPN-206ENST00000553597 NLRP6P59044 892 aa11.08□□□□□ -0.64
SNRPN-206ENST00000553597 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
SNRPN-206ENST00000553597 PANK3Q9H999 370 aa11.07□□□□□ -0.64
SNRPN-206ENST00000553597 SLIT3O75094 1523 aa11.07□□□□□ -0.64
SNRPN-206ENST00000553597 SPATA31A6Q5VVP1 1343 aa11.07□□□□□ -0.64
SNRPN-206ENST00000553597 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
SNRPN-206ENST00000553597 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
SNRPN-206ENST00000553597 C8orf37Q96NL8 207 aa11.06□□□□□ -0.64
SNRPN-206ENST00000553597 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
SNRPN-206ENST00000553597 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
SNRPN-206ENST00000553597 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
SNRPN-206ENST00000553597 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
SNRPN-206ENST00000553597 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
SNRPN-206ENST00000553597 ZC3H6P61129 1189 aaKnown RBP11.05□□□□□ -0.64
SNRPN-206ENST00000553597 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
SNRPN-206ENST00000553597 NFAT5O94916 1531 aa11.04□□□□□ -0.64
SNRPN-206ENST00000553597 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
SNRPN-206ENST00000553597 NWD2Q9ULI1 1742 aa11.04□□□□□ -0.64
SNRPN-206ENST00000553597 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
SNRPN-206ENST00000553597 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
SNRPN-206ENST00000553597 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
SNRPN-206ENST00000553597 CHRNA2Q15822 529 aa11.03□□□□□ -0.64
SNRPN-206ENST00000553597 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.03□□□□□ -0.64
SNRPN-206ENST00000553597 USP19O94966 1318 aa11.03□□□□□ -0.64
SNRPN-206ENST00000553597 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
SNRPN-206ENST00000553597 LMO7Q8WWI1 1683 aa11.02□□□□□ -0.64
SNRPN-206ENST00000553597 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
SNRPN-206ENST00000553597 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
SNRPN-206ENST00000553597 COG3Q96JB2 828 aa11.02□□□□□ -0.65
SNRPN-206ENST00000553597 COL18A1P39060 1754 aa11.02□□□□□ -0.65
SNRPN-206ENST00000553597 AFF2P51816 1311 aa11.02□□□□□ -0.65
SNRPN-206ENST00000553597 CGNL1Q0VF96 1302 aa11.02□□□□□ -0.65
SNRPN-206ENST00000553597 FBLN1P23142 703 aa11.01□□□□□ -0.65
SNRPN-206ENST00000553597 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
SNRPN-206ENST00000553597 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
SNRPN-206ENST00000553597 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
SNRPN-206ENST00000553597 PRDM11Q9NQV5 511 aa11.01□□□□□ -0.65
SNRPN-206ENST00000553597 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
SNRPN-206ENST00000553597 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
SNRPN-206ENST00000553597 FYB1O15117 783 aa11□□□□□ -0.65
SNRPN-206ENST00000553597 GCP02774 474 aa11□□□□□ -0.65
SNRPN-206ENST00000553597 USP31Q70CQ4 1352 aa11□□□□□ -0.65
SNRPN-206ENST00000553597 WNK3Q9BYP7 1800 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms