RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 CABP1Q9NZU7 370 aa11.69□□□□□ -0.54
PCNX1-204ENST00000553428 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-204ENST00000553428 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
PCNX1-204ENST00000553428 USP21Q9UK80 565 aa11.68□□□□□ -0.54
PCNX1-204ENST00000553428 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-204ENST00000553428 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-204ENST00000553428 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
PCNX1-204ENST00000553428 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 ST20-MTHFSA0A0A6YYL1 179 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 TESK2Q96S53 571 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 USP6P35125 1406 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 USP47Q96K76 1375 aa11.66□□□□□ -0.54
PCNX1-204ENST00000553428 SLIT2O94813 1529 aa11.65□□□□□ -0.54
PCNX1-204ENST00000553428 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
PCNX1-204ENST00000553428 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
PCNX1-204ENST00000553428 ABTB2Q8N961 1025 aa11.65□□□□□ -0.54
PCNX1-204ENST00000553428 ATRNO75882 1429 aa11.65□□□□□ -0.54
PCNX1-204ENST00000553428 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.55
PCNX1-204ENST00000553428 BCL9LQ86UU0 1499 aa11.64□□□□□ -0.55
PCNX1-204ENST00000553428 USP19O94966 1318 aa11.63□□□□□ -0.55
PCNX1-204ENST00000553428 TTC21AQ8NDW8 1320 aa11.63□□□□□ -0.55
PCNX1-204ENST00000553428 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
PCNX1-204ENST00000553428 SSH2Q76I76 1423 aa11.63□□□□□ -0.55
PCNX1-204ENST00000553428 TMF1P82094 1093 aa11.63□□□□□ -0.55
PCNX1-204ENST00000553428 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
PCNX1-204ENST00000553428 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
PCNX1-204ENST00000553428 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-204ENST00000553428 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
PCNX1-204ENST00000553428 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
PCNX1-204ENST00000553428 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
PCNX1-204ENST00000553428 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
PCNX1-204ENST00000553428 VPS72Q15906 364 aa11.61□□□□□ -0.55
PCNX1-204ENST00000553428 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
PCNX1-204ENST00000553428 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
PCNX1-204ENST00000553428 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 CPDO75976 1380 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 NLRP6P59044 892 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
PCNX1-204ENST00000553428 GCP02774 474 aa11.59□□□□□ -0.55
PCNX1-204ENST00000553428 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
PCNX1-204ENST00000553428 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 CRYBG1Q9Y4K1 1723 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 KCNH5Q8NCM2 988 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 COL14A1Q05707 1796 aaKnown RBP11.58□□□□□ -0.56
PCNX1-204ENST00000553428 RGS12O14924 1447 aa11.58□□□□□ -0.56
PCNX1-204ENST00000553428 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
PCNX1-204ENST00000553428 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
PCNX1-204ENST00000553428 USP31Q70CQ4 1352 aa11.57□□□□□ -0.56
PCNX1-204ENST00000553428 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
PCNX1-204ENST00000553428 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCNX1-204ENST00000553428 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
PCNX1-204ENST00000553428 SLIT3O75094 1523 aa11.56□□□□□ -0.56
PCNX1-204ENST00000553428 ONECUT3O60422 494 aaPredicted RBP11.56□□□□□ -0.56
PCNX1-204ENST00000553428 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
PCNX1-204ENST00000553428 PHRF1Q9P1Y6 1649 aaKnown RBP11.56□□□□□ -0.56
PCNX1-204ENST00000553428 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
PCNX1-204ENST00000553428 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
PCNX1-204ENST00000553428 AKAP12Q02952 1782 aa11.55□□□□□ -0.56
PCNX1-204ENST00000553428 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
PCNX1-204ENST00000553428 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
PCNX1-204ENST00000553428 CHRNA2Q15822 529 aa11.54□□□□□ -0.56
PCNX1-204ENST00000553428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
PCNX1-204ENST00000553428 SPATA31A5Q5VU36 1347 aa11.54□□□□□ -0.56
PCNX1-204ENST00000553428 SPATA31A7Q8IWB4 1347 aa11.54□□□□□ -0.56
PCNX1-204ENST00000553428 MON2Q7Z3U7 1717 aa11.53□□□□□ -0.56
PCNX1-204ENST00000553428 EVA1CP58658 441 aa11.53□□□□□ -0.56
PCNX1-204ENST00000553428 GLI3P10071 1580 aa11.53□□□□□ -0.56
PCNX1-204ENST00000553428 PIK3C2AO00443 1686 aa11.52□□□□□ -0.56
PCNX1-204ENST00000553428 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.57
PCNX1-204ENST00000553428 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.57
PCNX1-204ENST00000553428 NME9Q86XW9 330 aa11.52□□□□□ -0.57
PCNX1-204ENST00000553428 NRAPQ86VF7 1730 aa11.52□□□□□ -0.57
PCNX1-204ENST00000553428 SEPT12Q8IYM1 358 aa11.51□□□□□ -0.57
PCNX1-204ENST00000553428 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
PCNX1-204ENST00000553428 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
PCNX1-204ENST00000553428 SPATA31A1Q5TZJ5 1347 aa11.51□□□□□ -0.57
PCNX1-204ENST00000553428 ABCC6O95255 1503 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 USP54Q70EL1 1684 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 CAMTA1Q9Y6Y1 1673 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 BARGINQ6ZT62 677 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
PCNX1-204ENST00000553428 OVOS2A0A0J9YW53 1432 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 OVOS2Q6IE36 1432 aa11.5□□□□□ -0.57
PCNX1-204ENST00000553428 LMO7Q8WWI1 1683 aa11.49□□□□□ -0.57
PCNX1-204ENST00000553428 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
PCNX1-204ENST00000553428 CCDC125Q86Z20 511 aa11.49□□□□□ -0.57
PCNX1-204ENST00000553428 COG3Q96JB2 828 aa11.49□□□□□ -0.57
PCNX1-204ENST00000553428 COL5A2P05997 1499 aaPredicted RBP11.49□□□□□ -0.57
PCNX1-204ENST00000553428 NFAT5O94916 1531 aa11.49□□□□□ -0.57
PCNX1-204ENST00000553428 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
PCNX1-204ENST00000553428 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
PCNX1-204ENST00000553428 KRT27Q7Z3Y8 459 aa11.48□□□□□ -0.57
PCNX1-204ENST00000553428 TCP11L2Q8N4U5 519 aa11.48□□□□□ -0.57
PCNX1-204ENST00000553428 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms