RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C8orf37Q96NL8 207 aa25.94■■□□□ 1.74
CPSF2-202ENST00000553427 NINLQ9Y2I6 1382 aa25.94■■□□□ 1.74
CPSF2-202ENST00000553427 PAK3O75914 559 aaPredicted RBP25.93■■□□□ 1.74
CPSF2-202ENST00000553427 ILDR2Q71H61 639 aa25.93■■□□□ 1.74
CPSF2-202ENST00000553427 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
CPSF2-202ENST00000553427 CRYBG1Q9Y4K1 1723 aa25.93■■□□□ 1.74
CPSF2-202ENST00000553427 AKAP12Q02952 1782 aa25.92■■□□□ 1.74
CPSF2-202ENST00000553427 AFF2P51816 1311 aa25.92■■□□□ 1.74
CPSF2-202ENST00000553427 TMF1P82094 1093 aa25.91■■□□□ 1.74
CPSF2-202ENST00000553427 FNBP4Q8N3X1 1017 aaPredicted RBP25.91■■□□□ 1.74
CPSF2-202ENST00000553427 POTEAQ6S8J7 498 aa25.9■■□□□ 1.74
CPSF2-202ENST00000553427 NGLY1Q96IV0 654 aa25.89■■□□□ 1.74
CPSF2-202ENST00000553427 CD163L1Q9NR16 1453 aa25.89■■□□□ 1.73
CPSF2-202ENST00000553427 NRKQ7Z2Y5 1582 aa25.89■■□□□ 1.73
CPSF2-202ENST00000553427 CABLES1Q8TDN4 633 aa25.88■■□□□ 1.73
CPSF2-202ENST00000553427 MON2Q7Z3U7 1717 aa25.88■■□□□ 1.73
CPSF2-202ENST00000553427 HAP1P54257 671 aaPredicted RBP25.87■■□□□ 1.73
CPSF2-202ENST00000553427 CDCA8Q53HL2 280 aa25.87■■□□□ 1.73
CPSF2-202ENST00000553427 USP19O94966 1318 aa25.87■■□□□ 1.73
CPSF2-202ENST00000553427 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
CPSF2-202ENST00000553427 SLIT2O94813 1529 aa25.86■■□□□ 1.73
CPSF2-202ENST00000553427 PHRF1Q9P1Y6 1649 aaKnown RBP25.85■■□□□ 1.73
CPSF2-202ENST00000553427 KTN1Q86UP2 1357 aaKnown RBP25.85■■□□□ 1.73
CPSF2-202ENST00000553427 ABTB2Q8N961 1025 aa25.85■■□□□ 1.73
CPSF2-202ENST00000553427 TTC21AQ8NDW8 1320 aa25.85■■□□□ 1.73
CPSF2-202ENST00000553427 TMC1Q8TDI8 760 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 TERF2IPQ9NYB0 399 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 BCL9LQ86UU0 1499 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 PIK3C2AO00443 1686 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 TTC21BQ7Z4L5 1316 aa25.83■■□□□ 1.73
CPSF2-202ENST00000553427 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.83■■□□□ 1.72
CPSF2-202ENST00000553427 HDGFL2Q7Z4V5 671 aaPredicted RBP25.82■■□□□ 1.72
CPSF2-202ENST00000553427 NLRP13Q86W25 1043 aa25.81■■□□□ 1.72
CPSF2-202ENST00000553427 USP21Q9UK80 565 aa25.81■■□□□ 1.72
CPSF2-202ENST00000553427 A0A1W2PP64 1363 aa25.81■■□□□ 1.72
CPSF2-202ENST00000553427 ATRNO75882 1429 aa25.8■■□□□ 1.72
CPSF2-202ENST00000553427 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
CPSF2-202ENST00000553427 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
CPSF2-202ENST00000553427 SLIT3O75094 1523 aa25.79■■□□□ 1.72
CPSF2-202ENST00000553427 HSPA5P11021 654 aaKnown RBP25.79■■□□□ 1.72
CPSF2-202ENST00000553427 COL14A1Q05707 1796 aaKnown RBP25.79■■□□□ 1.72
CPSF2-202ENST00000553427 CDK12Q9NYV4 1490 aaPredicted RBP25.79■■□□□ 1.72
CPSF2-202ENST00000553427 PLCH1Q4KWH8 1693 aa25.78■■□□□ 1.72
CPSF2-202ENST00000553427 NUTM2GQ5VZR2 741 aa25.78■■□□□ 1.72
CPSF2-202ENST00000553427 ANKRD36BQ8N2N9 1353 aa25.78■■□□□ 1.72
CPSF2-202ENST00000553427 PLEKHG5O94827 1062 aa25.77■■□□□ 1.72
CPSF2-202ENST00000553427 TRPC5Q9UL62 973 aaPredicted RBP25.77■■□□□ 1.72
CPSF2-202ENST00000553427 CPDO75976 1380 aa25.77■■□□□ 1.72
CPSF2-202ENST00000553427 FAM83GA6ND36 823 aa25.76■■□□□ 1.71
CPSF2-202ENST00000553427 QTRT2Q9H974 415 aaKnown RBP25.76■■□□□ 1.71
CPSF2-202ENST00000553427 USP54Q70EL1 1684 aa25.76■■□□□ 1.71
CPSF2-202ENST00000553427 USP31Q70CQ4 1352 aa25.75■■□□□ 1.71
CPSF2-202ENST00000553427 NLRP6P59044 892 aa25.75■■□□□ 1.71
CPSF2-202ENST00000553427 UNC5CLQ8IV45 518 aa25.75■■□□□ 1.71
CPSF2-202ENST00000553427 KIAA0232Q92628 1395 aa25.74■■□□□ 1.71
CPSF2-202ENST00000553427 RXRBP28702 533 aa25.74■■□□□ 1.71
CPSF2-202ENST00000553427 RBM6P78332 1123 aaKnown RBP25.74■■□□□ 1.71
CPSF2-202ENST00000553427 MYOM1P52179 1685 aa25.73■■□□□ 1.71
CPSF2-202ENST00000553427 GCP02774 474 aa25.72■■□□□ 1.71
CPSF2-202ENST00000553427 PRDM11Q9NQV5 511 aa25.72■■□□□ 1.71
CPSF2-202ENST00000553427 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
CPSF2-202ENST00000553427 SOCS7O14512 581 aa25.69■■□□□ 1.7
CPSF2-202ENST00000553427 VPS72Q15906 364 aa25.68■■□□□ 1.7
CPSF2-202ENST00000553427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.68■■□□□ 1.7
CPSF2-202ENST00000553427 KCNH5Q8NCM2 988 aa25.68■■□□□ 1.7
CPSF2-202ENST00000553427 OVOS2A0A0J9YW53 1432 aa25.67■■□□□ 1.7
CPSF2-202ENST00000553427 ZC3H6P61129 1189 aaKnown RBP25.67■■□□□ 1.7
CPSF2-202ENST00000553427 OVOS2Q6IE36 1432 aa25.67■■□□□ 1.7
CPSF2-202ENST00000553427 LMO7Q8WWI1 1683 aa25.67■■□□□ 1.7
CPSF2-202ENST00000553427 NFAT5O94916 1531 aa25.67■■□□□ 1.7
CPSF2-202ENST00000553427 NME9Q86XW9 330 aa25.66■■□□□ 1.7
CPSF2-202ENST00000553427 GJD4Q96KN9 370 aaPredicted RBP25.66■■□□□ 1.7
CPSF2-202ENST00000553427 BTG4Q9NY30 223 aa25.66■■□□□ 1.7
CPSF2-202ENST00000553427 RGS12O14924 1447 aa25.65■■□□□ 1.7
CPSF2-202ENST00000553427 GLI3P10071 1580 aa25.64■■□□□ 1.69
CPSF2-202ENST00000553427 AATKQ6ZMQ8 1374 aa25.63■■□□□ 1.69
CPSF2-202ENST00000553427 ABCC6O95255 1503 aa25.63■■□□□ 1.69
CPSF2-202ENST00000553427 CHRNA2Q15822 529 aa25.62■■□□□ 1.69
CPSF2-202ENST00000553427 ZRANB1Q9UGI0 708 aa25.61■■□□□ 1.69
CPSF2-202ENST00000553427 CAMTA1Q9Y6Y1 1673 aa25.61■■□□□ 1.69
CPSF2-202ENST00000553427 ARHGEF25Q86VW2 580 aa25.6■■□□□ 1.69
CPSF2-202ENST00000553427 COL18A1P39060 1754 aa25.58■■□□□ 1.69
CPSF2-202ENST00000553427 C11orf95C9JLR9 678 aaPredicted RBP25.57■■□□□ 1.68
CPSF2-202ENST00000553427 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
CPSF2-202ENST00000553427 COL5A2P05997 1499 aaPredicted RBP25.57■■□□□ 1.68
CPSF2-202ENST00000553427 NSD3Q9BZ95 1437 aa25.56■■□□□ 1.68
CPSF2-202ENST00000553427 SPATA31A5Q5VU36 1347 aa25.56■■□□□ 1.68
CPSF2-202ENST00000553427 SPATA31A7Q8IWB4 1347 aa25.56■■□□□ 1.68
CPSF2-202ENST00000553427 COG3Q96JB2 828 aa25.55■■□□□ 1.68
CPSF2-202ENST00000553427 FYB1O15117 783 aa25.54■■□□□ 1.68
CPSF2-202ENST00000553427 ONECUT3O60422 494 aaPredicted RBP25.54■■□□□ 1.68
CPSF2-202ENST00000553427 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
CPSF2-202ENST00000553427 CCDC9Q9Y3X0 531 aaKnown RBP25.53■■□□□ 1.68
CPSF2-202ENST00000553427 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
CPSF2-202ENST00000553427 KIF20BQ96Q89 1820 aa25.53■■□□□ 1.68
CPSF2-202ENST00000553427 SOX12O15370 315 aa25.51■■□□□ 1.67
CPSF2-202ENST00000553427 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
CPSF2-202ENST00000553427 EVA1CP58658 441 aa25.5■■□□□ 1.67
CPSF2-202ENST00000553427 STRN4Q9NRL3 753 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms