RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
CCDC175-203ENST00000553317 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
CCDC175-203ENST00000553317 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
CCDC175-203ENST00000553317 ZNF511Q8NB15 262 aa11.82□□□□□ -0.52
CCDC175-203ENST00000553317 BAP1Q92560 729 aa11.82□□□□□ -0.52
CCDC175-203ENST00000553317 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
CCDC175-203ENST00000553317 VARSP26640 1264 aaKnown RBP11.81□□□□□ -0.52
CCDC175-203ENST00000553317 NPAS3Q8IXF0 933 aa11.81□□□□□ -0.52
CCDC175-203ENST00000553317 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
CCDC175-203ENST00000553317 WASF2Q9Y6W5 498 aa11.81□□□□□ -0.52
CCDC175-203ENST00000553317 BMP1P13497 986 aa11.8□□□□□ -0.52
CCDC175-203ENST00000553317 LYPD8Q6UX82 237 aa11.8□□□□□ -0.52
CCDC175-203ENST00000553317 NXF1Q9UBU9 619 aaKnown RBP11.8□□□□□ -0.52
CCDC175-203ENST00000553317 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CCDC175-203ENST00000553317 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
CCDC175-203ENST00000553317 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
CCDC175-203ENST00000553317 LINC01559Q495D7 138 aa11.78□□□□□ -0.52
CCDC175-203ENST00000553317 MYSM1Q5VVJ2 828 aa11.78□□□□□ -0.52
CCDC175-203ENST00000553317 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
CCDC175-203ENST00000553317 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
CCDC175-203ENST00000553317 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
CCDC175-203ENST00000553317 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
CCDC175-203ENST00000553317 PCDHB15Q9Y5E8 787 aa11.77□□□□□ -0.53
CCDC175-203ENST00000553317 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
CCDC175-203ENST00000553317 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
CCDC175-203ENST00000553317 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
CCDC175-203ENST00000553317 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
CCDC175-203ENST00000553317 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
CCDC175-203ENST00000553317 NUTM2DQ5VT03 806 aaPredicted RBP11.75□□□□□ -0.53
CCDC175-203ENST00000553317 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
CCDC175-203ENST00000553317 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
CCDC175-203ENST00000553317 LORP23490 312 aaPredicted RBP11.74□□□□□ -0.53
CCDC175-203ENST00000553317 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
CCDC175-203ENST00000553317 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
CCDC175-203ENST00000553317 HRCP23327 699 aa11.73□□□□□ -0.53
CCDC175-203ENST00000553317 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
CCDC175-203ENST00000553317 NNTQ13423 1086 aa11.73□□□□□ -0.53
CCDC175-203ENST00000553317 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
CCDC175-203ENST00000553317 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
CCDC175-203ENST00000553317 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
CCDC175-203ENST00000553317 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
CCDC175-203ENST00000553317 H3BM21 787 aa11.72□□□□□ -0.53
CCDC175-203ENST00000553317 TIMP2P16035 220 aa11.72□□□□□ -0.53
CCDC175-203ENST00000553317 ZFP42Q96MM3 310 aa11.72□□□□□ -0.53
CCDC175-203ENST00000553317 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
CCDC175-203ENST00000553317 TSC1Q92574 1164 aa11.7□□□□□ -0.54
CCDC175-203ENST00000553317 ADH1CP00326 375 aa11.69□□□□□ -0.54
CCDC175-203ENST00000553317 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
CCDC175-203ENST00000553317 GMPRP36959 345 aa11.68□□□□□ -0.54
CCDC175-203ENST00000553317 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
CCDC175-203ENST00000553317 FAM174AQ8TBP5 190 aa11.68□□□□□ -0.54
CCDC175-203ENST00000553317 IRF7Q92985 503 aa11.68□□□□□ -0.54
CCDC175-203ENST00000553317 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
CCDC175-203ENST00000553317 SKIV2LQ15477 1246 aaKnown RBP11.67□□□□□ -0.54
CCDC175-203ENST00000553317 FOXJ1Q92949 421 aa11.67□□□□□ -0.54
CCDC175-203ENST00000553317 LILRB3O75022 631 aa11.66□□□□□ -0.54
CCDC175-203ENST00000553317 CTHP32929 405 aa11.66□□□□□ -0.54
CCDC175-203ENST00000553317 SH3D19Q5HYK7 790 aa11.66□□□□□ -0.54
CCDC175-203ENST00000553317 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
CCDC175-203ENST00000553317 QPCTQ16769 361 aa11.65□□□□□ -0.54
CCDC175-203ENST00000553317 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
CCDC175-203ENST00000553317 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
CCDC175-203ENST00000553317 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
CCDC175-203ENST00000553317 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
CCDC175-203ENST00000553317 GRM5P41594 1212 aa11.63□□□□□ -0.55
CCDC175-203ENST00000553317 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
CCDC175-203ENST00000553317 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
CCDC175-203ENST00000553317 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
CCDC175-203ENST00000553317 NR5A1Q13285 461 aa11.62□□□□□ -0.55
CCDC175-203ENST00000553317 SCARF1Q14162 830 aa11.62□□□□□ -0.55
CCDC175-203ENST00000553317 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
CCDC175-203ENST00000553317 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
CCDC175-203ENST00000553317 NR3C2P08235 984 aa11.61□□□□□ -0.55
CCDC175-203ENST00000553317 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
CCDC175-203ENST00000553317 VEGFBP49765 207 aa11.6□□□□□ -0.55
CCDC175-203ENST00000553317 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
CCDC175-203ENST00000553317 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
CCDC175-203ENST00000553317 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
CCDC175-203ENST00000553317 BPHLQ86WA6 291 aaPredicted RBP11.59□□□□□ -0.55
CCDC175-203ENST00000553317 ZSCAN1Q8NBB4 408 aa11.59□□□□□ -0.55
CCDC175-203ENST00000553317 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
CCDC175-203ENST00000553317 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
CCDC175-203ENST00000553317 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
CCDC175-203ENST00000553317 FAM181BA6NEQ2 426 aa11.57□□□□□ -0.56
CCDC175-203ENST00000553317 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
CCDC175-203ENST00000553317 MAP4K5Q9Y4K4 846 aa11.57□□□□□ -0.56
CCDC175-203ENST00000553317 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
CCDC175-203ENST00000553317 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
CCDC175-203ENST00000553317 ARMC2Q8NEN0 867 aa11.55□□□□□ -0.56
CCDC175-203ENST00000553317 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC175-203ENST00000553317 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
CCDC175-203ENST00000553317 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
CCDC175-203ENST00000553317 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
CCDC175-203ENST00000553317 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
CCDC175-203ENST00000553317 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
CCDC175-203ENST00000553317 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
CCDC175-203ENST00000553317 AP1G2O75843 785 aa11.5□□□□□ -0.57
CCDC175-203ENST00000553317 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
CCDC175-203ENST00000553317 AGERQ15109 404 aa11.49□□□□□ -0.57
CCDC175-203ENST00000553317 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms