RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
SCFD1-209ENST00000553280 ZNF777Q9ULD5 760 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-209ENST00000553280 GJA5P36382 358 aa9.31□□□□□ -0.92
SCFD1-209ENST00000553280 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-209ENST00000553280 CABLES1Q8TDN4 633 aa9.31□□□□□ -0.92
SCFD1-209ENST00000553280 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
SCFD1-209ENST00000553280 HRCP23327 699 aa9.3□□□□□ -0.92
SCFD1-209ENST00000553280 CYP4X1Q8N118 509 aa9.3□□□□□ -0.92
SCFD1-209ENST00000553280 DGAT1O75907 488 aa9.29□□□□□ -0.92
SCFD1-209ENST00000553280 ZBTB3Q9H5J0 574 aa9.29□□□□□ -0.92
SCFD1-209ENST00000553280 CFAP99D6REC4 459 aa9.28□□□□□ -0.92
SCFD1-209ENST00000553280 CCNYL3P0C7X3 344 aa9.28□□□□□ -0.92
SCFD1-209ENST00000553280 SKOR1P84550 965 aa9.28□□□□□ -0.92
SCFD1-209ENST00000553280 PODXL2Q9NZ53 605 aa9.28□□□□□ -0.92
SCFD1-209ENST00000553280 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-209ENST00000553280 WNT7AO00755 349 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 MYT1Q01538 1121 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-209ENST00000553280 QPCTQ16769 361 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 PTPRNQ16849 979 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 MRGPRX2Q96LB1 330 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 TOR4AQ9NXH8 423 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 SERPINA10Q9UK55 444 aa9.27□□□□□ -0.93
SCFD1-209ENST00000553280 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-209ENST00000553280 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-209ENST00000553280 SOCS7O14512 581 aa9.26□□□□□ -0.93
SCFD1-209ENST00000553280 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-209ENST00000553280 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-209ENST00000553280 TSC1Q92574 1164 aa9.26□□□□□ -0.93
SCFD1-209ENST00000553280 LILRB3O75022 631 aa9.25□□□□□ -0.93
SCFD1-209ENST00000553280 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
SCFD1-209ENST00000553280 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
SCFD1-209ENST00000553280 DESI1Q6ICB0 168 aa9.25□□□□□ -0.93
SCFD1-209ENST00000553280 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
SCFD1-209ENST00000553280 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
SCFD1-209ENST00000553280 MTMR14Q8NCE2 650 aa9.24□□□□□ -0.93
SCFD1-209ENST00000553280 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-209ENST00000553280 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
SCFD1-209ENST00000553280 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
SCFD1-209ENST00000553280 CTHP32929 405 aa9.23□□□□□ -0.93
SCFD1-209ENST00000553280 WNT7BP56706 349 aa9.23□□□□□ -0.93
SCFD1-209ENST00000553280 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
SCFD1-209ENST00000553280 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
SCFD1-209ENST00000553280 SNIP1Q8TAD8 396 aaKnown RBP9.23□□□□□ -0.93
SCFD1-209ENST00000553280 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-209ENST00000553280 LYPD8Q6UX82 237 aa9.22□□□□□ -0.93
SCFD1-209ENST00000553280 J3QL48 77 aa9.21□□□□□ -0.94
SCFD1-209ENST00000553280 SH3BP2P78314 561 aa9.21□□□□□ -0.94
SCFD1-209ENST00000553280 RTL5Q5HYW3 569 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-209ENST00000553280 BAP1Q92560 729 aa9.21□□□□□ -0.94
SCFD1-209ENST00000553280 GDPD2Q9HCC8 539 aa9.21□□□□□ -0.94
SCFD1-209ENST00000553280 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
SCFD1-209ENST00000553280 PER1O15534 1290 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-209ENST00000553280 ZNF787Q6DD87 383 aa9.2□□□□□ -0.94
SCFD1-209ENST00000553280 AAASQ9NRG9 546 aa9.2□□□□□ -0.94
SCFD1-209ENST00000553280 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
SCFD1-209ENST00000553280 AP1G2O75843 785 aa9.19□□□□□ -0.94
SCFD1-209ENST00000553280 SMPD1P17405 629 aa9.19□□□□□ -0.94
SCFD1-209ENST00000553280 WWC1Q8IX03 1113 aa9.19□□□□□ -0.94
SCFD1-209ENST00000553280 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
SCFD1-209ENST00000553280 ALDH1A1P00352 501 aa9.17□□□□□ -0.94
SCFD1-209ENST00000553280 POTECB2RU33 542 aa9.16□□□□□ -0.94
SCFD1-209ENST00000553280 AXIN1O15169 862 aa9.16□□□□□ -0.94
SCFD1-209ENST00000553280 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-209ENST00000553280 AVPP01185 164 aa9.16□□□□□ -0.94
SCFD1-209ENST00000553280 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
SCFD1-209ENST00000553280 DACH1Q9UI36 760 aa9.16□□□□□ -0.94
SCFD1-209ENST00000553280 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
SCFD1-209ENST00000553280 HELBQ8NG08 1087 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-209ENST00000553280 HPS1Q92902 700 aa9.15□□□□□ -0.94
SCFD1-209ENST00000553280 SIAH2O43255 324 aa9.14□□□□□ -0.95
SCFD1-209ENST00000553280 ABL2P42684 1182 aa9.14□□□□□ -0.95
SCFD1-209ENST00000553280 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
SCFD1-209ENST00000553280 TLL2Q9Y6L7 1015 aa9.13□□□□□ -0.95
SCFD1-209ENST00000553280 CTDSPL2Q05D32 466 aa9.12□□□□□ -0.95
SCFD1-209ENST00000553280 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
SCFD1-209ENST00000553280 CRIPAKQ8N1N5 446 aa9.12□□□□□ -0.95
SCFD1-209ENST00000553280 FOXJ1Q92949 421 aa9.12□□□□□ -0.95
SCFD1-209ENST00000553280 GJD4Q96KN9 370 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-209ENST00000553280 CALR3Q96L12 384 aaKnown RBP9.12□□□□□ -0.95
SCFD1-209ENST00000553280 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
SCFD1-209ENST00000553280 ZBTB7CA1YPR0 619 aa9.11□□□□□ -0.95
SCFD1-209ENST00000553280 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
SCFD1-209ENST00000553280 AGERQ15109 404 aa9.1□□□□□ -0.95
SCFD1-209ENST00000553280 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
SCFD1-209ENST00000553280 POM121CA8CG34 1229 aa9.09□□□□□ -0.95
SCFD1-209ENST00000553280 VARSP26640 1264 aaKnown RBP9.09□□□□□ -0.95
SCFD1-209ENST00000553280 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-209ENST00000553280 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
SCFD1-209ENST00000553280 PPP1R15AO75807 674 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-209ENST00000553280 IRF5Q13568 498 aa9.08□□□□□ -0.96
SCFD1-209ENST00000553280 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
SCFD1-209ENST00000553280 GLMNQ92990 594 aa9.08□□□□□ -0.96
SCFD1-209ENST00000553280 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
SCFD1-209ENST00000553280 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
SCFD1-209ENST00000553280 ARID5BQ14865 1188 aa9.06□□□□□ -0.96
SCFD1-209ENST00000553280 C4orf48Q5BLP8 95 aa9.06□□□□□ -0.96
SCFD1-209ENST00000553280 FAM174AQ8TBP5 190 aa9.06□□□□□ -0.96
SCFD1-209ENST00000553280 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-209ENST00000553280 ZNF775Q96BV0 537 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms