RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 STK26Q9P289 416 aa9.45□□□□□ -0.9
BEST3-212ENST00000553096 RIMS2Q9UQ26 1411 aa9.45□□□□□ -0.9
BEST3-212ENST00000553096 EVC2Q86UK5 1308 aa9.45□□□□□ -0.9
BEST3-212ENST00000553096 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
BEST3-212ENST00000553096 HSPA2P54652 639 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 GOLGA2Q08379 1002 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 C3P01024 1663 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
BEST3-212ENST00000553096 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
BEST3-212ENST00000553096 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
BEST3-212ENST00000553096 ADGRB2O60241 1585 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
BEST3-212ENST00000553096 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 FRAT1Q92837 279 aaPredicted RBP9.43□□□□□ -0.9
BEST3-212ENST00000553096 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 ABCC11Q96J66 1382 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
BEST3-212ENST00000553096 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
BEST3-212ENST00000553096 MINK1Q8N4C8 1332 aaPredicted RBP9.42□□□□□ -0.9
BEST3-212ENST00000553096 KCNA4P22459 653 aa9.42□□□□□ -0.9
BEST3-212ENST00000553096 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
BEST3-212ENST00000553096 CPS1P31327 1500 aa9.42□□□□□ -0.9
BEST3-212ENST00000553096 TNNT2P45379 298 aaPredicted RBP9.42□□□□□ -0.9
BEST3-212ENST00000553096 C20orf194Q5TEA3 1177 aa9.42□□□□□ -0.9
BEST3-212ENST00000553096 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
BEST3-212ENST00000553096 MORC1Q86VD1 984 aa9.41□□□□□ -0.9
BEST3-212ENST00000553096 TRMT2AQ8IZ69 625 aaKnown RBP9.41□□□□□ -0.9
BEST3-212ENST00000553096 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
BEST3-212ENST00000553096 APAF1O14727 1248 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 SLFN5Q08AF3 891 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 FAM43AQ8N2R8 423 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 NSD2O96028 1365 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 METP08581 1390 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.4□□□□□ -0.9
BEST3-212ENST00000553096 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 BECN1Q14457 450 aa9.4□□□□□ -0.9
BEST3-212ENST00000553096 MED14O60244 1454 aa9.4□□□□□ -0.91
BEST3-212ENST00000553096 NKTRP30414 1462 aaKnown RBP9.4□□□□□ -0.91
BEST3-212ENST00000553096 MAPK8IP3Q9UPT6 1336 aa9.4□□□□□ -0.91
BEST3-212ENST00000553096 ZFP91Q96JP5 570 aaPredicted RBP9.39□□□□□ -0.91
BEST3-212ENST00000553096 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
BEST3-212ENST00000553096 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
BEST3-212ENST00000553096 WAPLQ7Z5K2 1190 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 NRKQ7Z2Y5 1582 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 MTHFSP49914 203 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
BEST3-212ENST00000553096 TNRQ92752 1358 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 E9PSI1 815 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 SKAP1Q86WV1 359 aa9.38□□□□□ -0.91
BEST3-212ENST00000553096 TECPR2O15040 1411 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
BEST3-212ENST00000553096 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 FRAT2O75474 233 aaPredicted RBP9.37□□□□□ -0.91
BEST3-212ENST00000553096 RGS3P49796 1198 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 PDE3AQ14432 1141 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
BEST3-212ENST00000553096 POGKQ9P215 609 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 ATP7BP35670 1465 aa9.37□□□□□ -0.91
BEST3-212ENST00000553096 RGPD8O14715 1765 aaPredicted RBP9.36□□□□□ -0.91
BEST3-212ENST00000553096 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
BEST3-212ENST00000553096 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
BEST3-212ENST00000553096 FYB1O15117 783 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
BEST3-212ENST00000553096 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 PHF23Q9BUL5 403 aaPredicted RBP9.35□□□□□ -0.91
BEST3-212ENST00000553096 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 UPF2Q9HAU5 1272 aaKnown RBP9.35□□□□□ -0.91
BEST3-212ENST00000553096 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 TMEM2Q9UHN6 1383 aa9.35□□□□□ -0.91
BEST3-212ENST00000553096 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
BEST3-212ENST00000553096 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
BEST3-212ENST00000553096 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
BEST3-212ENST00000553096 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
BEST3-212ENST00000553096 LRRC7Q96NW7 1537 aa9.34□□□□□ -0.91
BEST3-212ENST00000553096 NALCNQ8IZF0 1738 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
BEST3-212ENST00000553096 SLIT1O75093 1534 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 PTPRUQ92729 1446 aa9.33□□□□□ -0.92
BEST3-212ENST00000553096 TCP11L2Q8N4U5 519 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 CLUAP1Q96AJ1 413 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 BCAR3O75815 825 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 SECISBP2LQ93073 1101 aaKnown RBP9.32□□□□□ -0.92
BEST3-212ENST00000553096 PNPLA6Q8IY17 1366 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms