RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-209ENST00000552896 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
TRAFD1-209ENST00000552896 DISP3Q9P2K9 1392 aa16.48■□□□□ 0.23
TRAFD1-209ENST00000552896 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
TRAFD1-209ENST00000552896 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-209ENST00000552896 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-209ENST00000552896 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
TRAFD1-209ENST00000552896 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
TRAFD1-209ENST00000552896 TMF1P82094 1093 aa16.44■□□□□ 0.22
TRAFD1-209ENST00000552896 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
TRAFD1-209ENST00000552896 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
TRAFD1-209ENST00000552896 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
TRAFD1-209ENST00000552896 EIF4G2P78344 907 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAFD1-209ENST00000552896 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-209ENST00000552896 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-209ENST00000552896 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-209ENST00000552896 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-209ENST00000552896 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-209ENST00000552896 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
TRAFD1-209ENST00000552896 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
TRAFD1-209ENST00000552896 SLIT3O75094 1523 aa16.4■□□□□ 0.22
TRAFD1-209ENST00000552896 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
TRAFD1-209ENST00000552896 A0A1W2PP64 1363 aa16.39■□□□□ 0.21
TRAFD1-209ENST00000552896 KTN1Q86UP2 1357 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-209ENST00000552896 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-209ENST00000552896 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-209ENST00000552896 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
TRAFD1-209ENST00000552896 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-209ENST00000552896 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
TRAFD1-209ENST00000552896 USP19O94966 1318 aa16.37■□□□□ 0.21
TRAFD1-209ENST00000552896 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
TRAFD1-209ENST00000552896 LTN1O94822 1766 aa16.36■□□□□ 0.21
TRAFD1-209ENST00000552896 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
TRAFD1-209ENST00000552896 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
TRAFD1-209ENST00000552896 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
TRAFD1-209ENST00000552896 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
TRAFD1-209ENST00000552896 SLIT2O94813 1529 aa16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 ADAMTS2O95450 1211 aa16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-209ENST00000552896 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-209ENST00000552896 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
TRAFD1-209ENST00000552896 AFF2P51816 1311 aa16.34■□□□□ 0.21
TRAFD1-209ENST00000552896 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
TRAFD1-209ENST00000552896 NFAT5O94916 1531 aa16.34■□□□□ 0.21
TRAFD1-209ENST00000552896 ABTB2Q8N961 1025 aa16.33■□□□□ 0.2
TRAFD1-209ENST00000552896 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
TRAFD1-209ENST00000552896 ABCC6O95255 1503 aa16.32■□□□□ 0.2
TRAFD1-209ENST00000552896 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-209ENST00000552896 COL18A1P39060 1754 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 OVOS2A0A0J9YW53 1432 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 OVOS2Q6IE36 1432 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
TRAFD1-209ENST00000552896 CPDO75976 1380 aa16.3■□□□□ 0.2
TRAFD1-209ENST00000552896 USP31Q70CQ4 1352 aa16.3■□□□□ 0.2
TRAFD1-209ENST00000552896 FNBP4Q8N3X1 1017 aaPredicted RBP16.3■□□□□ 0.2
TRAFD1-209ENST00000552896 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
TRAFD1-209ENST00000552896 ATRNO75882 1429 aa16.29■□□□□ 0.2
TRAFD1-209ENST00000552896 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
TRAFD1-209ENST00000552896 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-209ENST00000552896 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
TRAFD1-209ENST00000552896 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
TRAFD1-209ENST00000552896 GLI3P10071 1580 aa16.27■□□□□ 0.2
TRAFD1-209ENST00000552896 WNK3Q9BYP7 1800 aa16.27■□□□□ 0.2
TRAFD1-209ENST00000552896 NLRP6P59044 892 aa16.27■□□□□ 0.2
TRAFD1-209ENST00000552896 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
TRAFD1-209ENST00000552896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAFD1-209ENST00000552896 USP21Q9UK80 565 aa16.26■□□□□ 0.19
TRAFD1-209ENST00000552896 NSD3Q9BZ95 1437 aa16.26■□□□□ 0.19
TRAFD1-209ENST00000552896 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-209ENST00000552896 PRDM11Q9NQV5 511 aa16.25■□□□□ 0.19
TRAFD1-209ENST00000552896 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
TRAFD1-209ENST00000552896 GCP02774 474 aa16.24■□□□□ 0.19
TRAFD1-209ENST00000552896 NME9Q86XW9 330 aa16.24■□□□□ 0.19
TRAFD1-209ENST00000552896 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
TRAFD1-209ENST00000552896 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
TRAFD1-209ENST00000552896 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
TRAFD1-209ENST00000552896 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-209ENST00000552896 C11orf95C9JLR9 678 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 ILDR2Q71H61 639 aa16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 COL5A2P05997 1499 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
TRAFD1-209ENST00000552896 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-209ENST00000552896 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
TRAFD1-209ENST00000552896 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
TRAFD1-209ENST00000552896 MAP2P11137 1827 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-209ENST00000552896 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.18
TRAFD1-209ENST00000552896 RGS12O14924 1447 aa16.2■□□□□ 0.18
TRAFD1-209ENST00000552896 QTRT2Q9H974 415 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-209ENST00000552896 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
TRAFD1-209ENST00000552896 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
TRAFD1-209ENST00000552896 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-209ENST00000552896 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
TRAFD1-209ENST00000552896 BTG4Q9NY30 223 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms