RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 AFF2P51816 1311 aa25.91■■□□□ 1.74
PRPF40B-216ENST00000552301 TMF1P82094 1093 aa25.9■■□□□ 1.74
PRPF40B-216ENST00000552301 TMC1Q8TDI8 760 aa25.9■■□□□ 1.74
PRPF40B-216ENST00000552301 BRD4O60885 1362 aaPredicted RBP25.9■■□□□ 1.74
PRPF40B-216ENST00000552301 USP6P35125 1406 aa25.89■■□□□ 1.74
PRPF40B-216ENST00000552301 CABLES1Q8TDN4 633 aa25.89■■□□□ 1.74
PRPF40B-216ENST00000552301 PUS7Q96PZ0 661 aaKnown RBP25.89■■□□□ 1.74
PRPF40B-216ENST00000552301 ABCA3Q99758 1704 aa25.88■■□□□ 1.73
PRPF40B-216ENST00000552301 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
PRPF40B-216ENST00000552301 ZNF692Q9BU19 519 aaPredicted RBP25.87■■□□□ 1.73
PRPF40B-216ENST00000552301 ABTB2Q8N961 1025 aa25.86■■□□□ 1.73
PRPF40B-216ENST00000552301 EIF4G2P78344 907 aaKnown RBP eCLIP25.85■■□□□ 1.73
PRPF40B-216ENST00000552301 CDCA8Q53HL2 280 aa25.85■■□□□ 1.73
PRPF40B-216ENST00000552301 POTEAQ6S8J7 498 aa25.85■■□□□ 1.73
PRPF40B-216ENST00000552301 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
PRPF40B-216ENST00000552301 NUTM2GQ5VZR2 741 aa25.84■■□□□ 1.73
PRPF40B-216ENST00000552301 NINLQ9Y2I6 1382 aa25.83■■□□□ 1.73
PRPF40B-216ENST00000552301 HDGFL2Q7Z4V5 671 aaPredicted RBP25.83■■□□□ 1.73
PRPF40B-216ENST00000552301 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
PRPF40B-216ENST00000552301 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
PRPF40B-216ENST00000552301 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
PRPF40B-216ENST00000552301 USP21Q9UK80 565 aa25.81■■□□□ 1.72
PRPF40B-216ENST00000552301 NLRP13Q86W25 1043 aa25.8■■□□□ 1.72
PRPF40B-216ENST00000552301 SLC12A5Q9H2X9 1139 aa25.8■■□□□ 1.72
PRPF40B-216ENST00000552301 FNBP4Q8N3X1 1017 aaPredicted RBP25.79■■□□□ 1.72
PRPF40B-216ENST00000552301 MON2Q7Z3U7 1717 aa25.78■■□□□ 1.72
PRPF40B-216ENST00000552301 CRYBG1Q9Y4K1 1723 aa25.78■■□□□ 1.72
PRPF40B-216ENST00000552301 TTC21BQ7Z4L5 1316 aa25.78■■□□□ 1.72
PRPF40B-216ENST00000552301 HSPA5P11021 654 aaKnown RBP25.77■■□□□ 1.72
PRPF40B-216ENST00000552301 TTC21AQ8NDW8 1320 aa25.77■■□□□ 1.72
PRPF40B-216ENST00000552301 SSH2Q76I76 1423 aa25.77■■□□□ 1.72
PRPF40B-216ENST00000552301 PHRF1Q9P1Y6 1649 aaKnown RBP25.77■■□□□ 1.72
PRPF40B-216ENST00000552301 NRKQ7Z2Y5 1582 aa25.75■■□□□ 1.71
PRPF40B-216ENST00000552301 CD163L1Q9NR16 1453 aa25.75■■□□□ 1.71
PRPF40B-216ENST00000552301 NLRP6P59044 892 aa25.75■■□□□ 1.71
PRPF40B-216ENST00000552301 QTRT2Q9H974 415 aaKnown RBP25.75■■□□□ 1.71
PRPF40B-216ENST00000552301 TRPC5Q9UL62 973 aaPredicted RBP25.75■■□□□ 1.71
PRPF40B-216ENST00000552301 A0A1W2PP64 1363 aa25.74■■□□□ 1.71
PRPF40B-216ENST00000552301 USP19O94966 1318 aa25.74■■□□□ 1.71
PRPF40B-216ENST00000552301 PRDM11Q9NQV5 511 aa25.74■■□□□ 1.71
PRPF40B-216ENST00000552301 PIK3C2AO00443 1686 aa25.74■■□□□ 1.71
PRPF40B-216ENST00000552301 SLIT2O94813 1529 aa25.73■■□□□ 1.71
PRPF40B-216ENST00000552301 RXRBP28702 533 aa25.73■■□□□ 1.71
PRPF40B-216ENST00000552301 EDC4Q6P2E9 1401 aaKnown RBP25.72■■□□□ 1.71
PRPF40B-216ENST00000552301 PLCH1Q4KWH8 1693 aa25.72■■□□□ 1.71
PRPF40B-216ENST00000552301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.72■■□□□ 1.71
PRPF40B-216ENST00000552301 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
PRPF40B-216ENST00000552301 UNC5CLQ8IV45 518 aa25.71■■□□□ 1.71
PRPF40B-216ENST00000552301 POLR3GLQ9BT43 218 aa25.71■■□□□ 1.71
PRPF40B-216ENST00000552301 BCL9LQ86UU0 1499 aa25.71■■□□□ 1.71
PRPF40B-216ENST00000552301 KIAA0232Q92628 1395 aa25.7■■□□□ 1.71
PRPF40B-216ENST00000552301 FAM83GA6ND36 823 aa25.7■■□□□ 1.7
PRPF40B-216ENST00000552301 ZC3H6P61129 1189 aaKnown RBP25.7■■□□□ 1.7
PRPF40B-216ENST00000552301 RBM6P78332 1123 aaKnown RBP25.7■■□□□ 1.7
PRPF40B-216ENST00000552301 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.7■■□□□ 1.7
PRPF40B-216ENST00000552301 NWD2Q9ULI1 1742 aa25.7■■□□□ 1.7
PRPF40B-216ENST00000552301 ANKRD36BQ8N2N9 1353 aa25.69■■□□□ 1.7
PRPF40B-216ENST00000552301 ATRNO75882 1429 aa25.69■■□□□ 1.7
PRPF40B-216ENST00000552301 GCP02774 474 aa25.67■■□□□ 1.7
PRPF40B-216ENST00000552301 BTG4Q9NY30 223 aa25.66■■□□□ 1.7
PRPF40B-216ENST00000552301 SLIT3O75094 1523 aa25.66■■□□□ 1.7
PRPF40B-216ENST00000552301 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.7
PRPF40B-216ENST00000552301 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
PRPF40B-216ENST00000552301 NME9Q86XW9 330 aa25.64■■□□□ 1.7
PRPF40B-216ENST00000552301 KCNH5Q8NCM2 988 aa25.64■■□□□ 1.7
PRPF40B-216ENST00000552301 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
PRPF40B-216ENST00000552301 CPDO75976 1380 aa25.64■■□□□ 1.69
PRPF40B-216ENST00000552301 CDK12Q9NYV4 1490 aaPredicted RBP25.64■■□□□ 1.69
PRPF40B-216ENST00000552301 MYOM1P52179 1685 aa25.62■■□□□ 1.69
PRPF40B-216ENST00000552301 USP31Q70CQ4 1352 aa25.62■■□□□ 1.69
PRPF40B-216ENST00000552301 SOX12O15370 315 aa25.62■■□□□ 1.69
PRPF40B-216ENST00000552301 NRAPQ86VF7 1730 aa25.61■■□□□ 1.69
PRPF40B-216ENST00000552301 GJD4Q96KN9 370 aaPredicted RBP25.61■■□□□ 1.69
PRPF40B-216ENST00000552301 VPS72Q15906 364 aa25.6■■□□□ 1.69
PRPF40B-216ENST00000552301 ZRANB1Q9UGI0 708 aa25.59■■□□□ 1.69
PRPF40B-216ENST00000552301 USP54Q70EL1 1684 aa25.58■■□□□ 1.69
PRPF40B-216ENST00000552301 RGS12O14924 1447 aa25.57■■□□□ 1.68
PRPF40B-216ENST00000552301 STRN4Q9NRL3 753 aa25.57■■□□□ 1.68
PRPF40B-216ENST00000552301 EVA1CP58658 441 aa25.56■■□□□ 1.68
PRPF40B-216ENST00000552301 COG3Q96JB2 828 aa25.55■■□□□ 1.68
PRPF40B-216ENST00000552301 OVOS2A0A0J9YW53 1432 aa25.54■■□□□ 1.68
PRPF40B-216ENST00000552301 OVOS2Q6IE36 1432 aa25.54■■□□□ 1.68
PRPF40B-216ENST00000552301 NFAT5O94916 1531 aa25.54■■□□□ 1.68
PRPF40B-216ENST00000552301 GLI3P10071 1580 aa25.54■■□□□ 1.68
PRPF40B-216ENST00000552301 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
PRPF40B-216ENST00000552301 LMO7Q8WWI1 1683 aa25.53■■□□□ 1.68
PRPF40B-216ENST00000552301 AATKQ6ZMQ8 1374 aa25.53■■□□□ 1.68
PRPF40B-216ENST00000552301 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
PRPF40B-216ENST00000552301 ARHGEF25Q86VW2 580 aa25.51■■□□□ 1.67
PRPF40B-216ENST00000552301 A0A0G2JS52 829 aa25.5■■□□□ 1.67
PRPF40B-216ENST00000552301 MYT1Q01538 1121 aa25.5■■□□□ 1.67
PRPF40B-216ENST00000552301 KIF20BQ96Q89 1820 aa25.5■■□□□ 1.67
PRPF40B-216ENST00000552301 COL5A2P05997 1499 aaPredicted RBP25.48■■□□□ 1.67
PRPF40B-216ENST00000552301 SPATA31A5Q5VU36 1347 aa25.48■■□□□ 1.67
PRPF40B-216ENST00000552301 SPATA31A7Q8IWB4 1347 aa25.48■■□□□ 1.67
PRPF40B-216ENST00000552301 C11orf95C9JLR9 678 aaPredicted RBP25.48■■□□□ 1.67
PRPF40B-216ENST00000552301 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
PRPF40B-216ENST00000552301 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
PRPF40B-216ENST00000552301 FYB1O15117 783 aa25.47■■□□□ 1.67
PRPF40B-216ENST00000552301 CARD14Q9BXL6 1004 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms