RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
RAB3IP-216ENST00000552199 CDC42BPGQ6DT37 1551 aa18.32■□□□□ 0.52
RAB3IP-216ENST00000552199 PNPLA6Q8IY17 1366 aa18.31■□□□□ 0.52
RAB3IP-216ENST00000552199 C20orf194Q5TEA3 1177 aa18.31■□□□□ 0.52
RAB3IP-216ENST00000552199 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
RAB3IP-216ENST00000552199 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
RAB3IP-216ENST00000552199 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
RAB3IP-216ENST00000552199 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
RAB3IP-216ENST00000552199 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
RAB3IP-216ENST00000552199 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
RAB3IP-216ENST00000552199 DIAPH1O60610 1272 aaKnown RBP18.28■□□□□ 0.52
RAB3IP-216ENST00000552199 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
RAB3IP-216ENST00000552199 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
RAB3IP-216ENST00000552199 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
RAB3IP-216ENST00000552199 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.52
RAB3IP-216ENST00000552199 NCKAP5LQ9HCH0 1330 aa18.27■□□□□ 0.52
RAB3IP-216ENST00000552199 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
RAB3IP-216ENST00000552199 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
RAB3IP-216ENST00000552199 POLKQ9UBT6 870 aa18.27■□□□□ 0.51
RAB3IP-216ENST00000552199 TBX22Q9Y458 520 aa18.27■□□□□ 0.51
RAB3IP-216ENST00000552199 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.51
RAB3IP-216ENST00000552199 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
RAB3IP-216ENST00000552199 BCAR3O75815 825 aa18.25■□□□□ 0.51
RAB3IP-216ENST00000552199 NME9Q86XW9 330 aa18.25■□□□□ 0.51
RAB3IP-216ENST00000552199 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
RAB3IP-216ENST00000552199 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
RAB3IP-216ENST00000552199 DIP2AQ14689 1571 aa18.23■□□□□ 0.51
RAB3IP-216ENST00000552199 FBLN1P23142 703 aa18.23■□□□□ 0.51
RAB3IP-216ENST00000552199 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
RAB3IP-216ENST00000552199 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
RAB3IP-216ENST00000552199 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
RAB3IP-216ENST00000552199 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
RAB3IP-216ENST00000552199 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
RAB3IP-216ENST00000552199 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
RAB3IP-216ENST00000552199 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
RAB3IP-216ENST00000552199 COG3Q96JB2 828 aa18.21■□□□□ 0.51
RAB3IP-216ENST00000552199 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
RAB3IP-216ENST00000552199 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
RAB3IP-216ENST00000552199 FCHSD2O94868 740 aa18.2■□□□□ 0.5
RAB3IP-216ENST00000552199 PTCH1Q13635 1447 aa18.2■□□□□ 0.5
RAB3IP-216ENST00000552199 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
RAB3IP-216ENST00000552199 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
RAB3IP-216ENST00000552199 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
RAB3IP-216ENST00000552199 ACEP12821 1306 aa18.17■□□□□ 0.5
RAB3IP-216ENST00000552199 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
RAB3IP-216ENST00000552199 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
RAB3IP-216ENST00000552199 IL16Q14005 1332 aa18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 TTC21BQ7Z4L5 1316 aa18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 LRRC7Q96NW7 1537 aa18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 RIPK4P57078 832 aa18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 XRN1Q8IZH2 1706 aaKnown RBP18.16■□□□□ 0.5
RAB3IP-216ENST00000552199 IL13P35225 146 aa18.15■□□□□ 0.5
RAB3IP-216ENST00000552199 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
RAB3IP-216ENST00000552199 USP6P35125 1406 aa18.14■□□□□ 0.49
RAB3IP-216ENST00000552199 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
RAB3IP-216ENST00000552199 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
RAB3IP-216ENST00000552199 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
RAB3IP-216ENST00000552199 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
RAB3IP-216ENST00000552199 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
RAB3IP-216ENST00000552199 NEFMP07197 916 aa18.12■□□□□ 0.49
RAB3IP-216ENST00000552199 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
RAB3IP-216ENST00000552199 MS4A1P11836 297 aa18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 TSR2Q969E8 191 aaKnown RBP18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 OVOS2A0A0J9YW53 1432 aa18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 OVOS2Q6IE36 1432 aa18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
RAB3IP-216ENST00000552199 HMOX1P09601 288 aa18.1■□□□□ 0.49
RAB3IP-216ENST00000552199 ADAMTSL3P82987 1691 aa18.1■□□□□ 0.49
RAB3IP-216ENST00000552199 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
RAB3IP-216ENST00000552199 PANK1Q8TE04 598 aa18.1■□□□□ 0.49
RAB3IP-216ENST00000552199 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-216ENST00000552199 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
RAB3IP-216ENST00000552199 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
RAB3IP-216ENST00000552199 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
RAB3IP-216ENST00000552199 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
RAB3IP-216ENST00000552199 KCNA6P17658 529 aa18.08■□□□□ 0.49
RAB3IP-216ENST00000552199 COG6Q9Y2V7 657 aa18.08■□□□□ 0.48
RAB3IP-216ENST00000552199 TTC21AQ8NDW8 1320 aa18.08■□□□□ 0.48
RAB3IP-216ENST00000552199 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
RAB3IP-216ENST00000552199 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
RAB3IP-216ENST00000552199 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
RAB3IP-216ENST00000552199 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
RAB3IP-216ENST00000552199 MSH5O43196 834 aa18.06■□□□□ 0.48
RAB3IP-216ENST00000552199 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
RAB3IP-216ENST00000552199 AAMPQ13685 434 aa18.05■□□□□ 0.48
RAB3IP-216ENST00000552199 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
RAB3IP-216ENST00000552199 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
RAB3IP-216ENST00000552199 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 FMN2Q9NZ56 1722 aa18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 RLBP1P12271 317 aa18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 PDE4AP27815 886 aa18.04■□□□□ 0.48
RAB3IP-216ENST00000552199 SKAP1Q86WV1 359 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms