RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 PLEKHG1Q9ULL1 1385 aa8.49□□□□□ -1.05
HOXB3-213ENST00000552000 NOS1P29475 1434 aa8.49□□□□□ -1.05
HOXB3-213ENST00000552000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.49□□□□□ -1.05
HOXB3-213ENST00000552000 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
HOXB3-213ENST00000552000 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
HOXB3-213ENST00000552000 SLC52A1Q9NWF4 448 aa8.49□□□□□ -1.05
HOXB3-213ENST00000552000 RGS12O14924 1447 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 ABCC5O15440 1437 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 RIMS2Q9UQ26 1411 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
HOXB3-213ENST00000552000 KANK4Q5T7N3 995 aaPredicted RBP8.48□□□□□ -1.05
HOXB3-213ENST00000552000 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
HOXB3-213ENST00000552000 BRINP3Q76B58 766 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
HOXB3-213ENST00000552000 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 TBX22Q9Y458 520 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 LMTK2Q8IWU2 1503 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 DIP2AQ14689 1571 aa8.48□□□□□ -1.05
HOXB3-213ENST00000552000 NCOA3Q9Y6Q9 1424 aa8.47□□□□□ -1.05
HOXB3-213ENST00000552000 CROCC2H7BZ55 1655 aa8.47□□□□□ -1.05
HOXB3-213ENST00000552000 PBX2P40425 430 aa8.47□□□□□ -1.05
HOXB3-213ENST00000552000 RBM6P78332 1123 aaKnown RBP8.47□□□□□ -1.05
HOXB3-213ENST00000552000 QTRT2Q9H974 415 aaKnown RBP8.47□□□□□ -1.05
HOXB3-213ENST00000552000 HDGFP51858 240 aaKnown RBP8.46□□□□□ -1.06
HOXB3-213ENST00000552000 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
HOXB3-213ENST00000552000 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
HOXB3-213ENST00000552000 GCC2Q8IWJ2 1684 aa8.46□□□□□ -1.06
HOXB3-213ENST00000552000 CHGAP10645 457 aaKnown RBP8.45□□□□□ -1.06
HOXB3-213ENST00000552000 NLRP6P59044 892 aa8.45□□□□□ -1.06
HOXB3-213ENST00000552000 ADAMTS13Q76LX8 1427 aa8.45□□□□□ -1.06
HOXB3-213ENST00000552000 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.44□□□□□ -1.06
HOXB3-213ENST00000552000 ATAD2Q6PL18 1390 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 DAPK1P53355 1430 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 VPS8Q8N3P4 1428 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
HOXB3-213ENST00000552000 TMEM131LA2VDJ0 1609 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 ADAMTS2O95450 1211 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 NUDT7P0C024 238 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
HOXB3-213ENST00000552000 LRRC59Q96AG4 307 aaKnown RBP8.43□□□□□ -1.06
HOXB3-213ENST00000552000 NGLY1Q96IV0 654 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 HCSTQ9UBK5 93 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
HOXB3-213ENST00000552000 PNPLA6Q8IY17 1366 aa8.42□□□□□ -1.06
HOXB3-213ENST00000552000 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
HOXB3-213ENST00000552000 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
HOXB3-213ENST00000552000 SETBP1Q9Y6X0 1596 aa8.42□□□□□ -1.06
HOXB3-213ENST00000552000 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
HOXB3-213ENST00000552000 RPRD2Q5VT52 1461 aaKnown RBP8.41□□□□□ -1.06
HOXB3-213ENST00000552000 MST1RQ04912 1400 aa8.41□□□□□ -1.06
HOXB3-213ENST00000552000 RNF25Q96BH1 459 aaPredicted RBP8.41□□□□□ -1.06
HOXB3-213ENST00000552000 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
HOXB3-213ENST00000552000 TRPM2O94759 1503 aa8.4□□□□□ -1.06
HOXB3-213ENST00000552000 DCCP43146 1447 aa8.4□□□□□ -1.06
HOXB3-213ENST00000552000 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.06
HOXB3-213ENST00000552000 USP21Q9UK80 565 aa8.39□□□□□ -1.07
HOXB3-213ENST00000552000 LHX6Q9UPM6 363 aa8.39□□□□□ -1.07
HOXB3-213ENST00000552000 ANKRD50Q9ULJ7 1429 aa8.38□□□□□ -1.07
HOXB3-213ENST00000552000 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
HOXB3-213ENST00000552000 UNC13BO14795 1591 aa8.38□□□□□ -1.07
HOXB3-213ENST00000552000 XRN1Q8IZH2 1706 aaKnown RBP8.37□□□□□ -1.07
HOXB3-213ENST00000552000 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
HOXB3-213ENST00000552000 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
HOXB3-213ENST00000552000 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 PCDHGA4Q9Y5G9 962 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 ADGRL2O95490 1459 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 E9PCH4 1651 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 ATRNO75882 1429 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
HOXB3-213ENST00000552000 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
HOXB3-213ENST00000552000 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
HOXB3-213ENST00000552000 CCDC125Q86Z20 511 aa8.35□□□□□ -1.07
HOXB3-213ENST00000552000 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
HOXB3-213ENST00000552000 NRXN3Q9Y4C0 1643 aa8.35□□□□□ -1.07
HOXB3-213ENST00000552000 METP08581 1390 aa8.35□□□□□ -1.07
HOXB3-213ENST00000552000 NALCNQ8IZF0 1738 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
HOXB3-213ENST00000552000 KIF3CO14782 793 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
HOXB3-213ENST00000552000 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 PTCH1Q13635 1447 aa8.34□□□□□ -1.07
HOXB3-213ENST00000552000 SOS2Q07890 1332 aaPredicted RBP8.33□□□□□ -1.08
HOXB3-213ENST00000552000 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
HOXB3-213ENST00000552000 SLC34A2O95436 690 aa8.33□□□□□ -1.08
HOXB3-213ENST00000552000 ZNF326Q5BKZ1 582 aaKnown RBP8.33□□□□□ -1.08
HOXB3-213ENST00000552000 DEFB132Q7Z7B7 95 aa8.32□□□□□ -1.08
HOXB3-213ENST00000552000 GJD4Q96KN9 370 aaPredicted RBP8.31□□□□□ -1.08
HOXB3-213ENST00000552000 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
HOXB3-213ENST00000552000 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
HOXB3-213ENST00000552000 LAMC1P11047 1609 aa8.31□□□□□ -1.08
HOXB3-213ENST00000552000 BCL9LQ86UU0 1499 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms