RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 PANK3Q9H999 370 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 SHPRHQ149N8 1683 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 ZMYM3Q14202 1370 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 PIK3C2BO00750 1634 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 NKTRP30414 1462 aaKnown RBP7.04□□□□□ -1.28
CCNT1-204ENST00000551989 ARHGEF28Q8N1W1 1705 aaKnown RBP7.04□□□□□ -1.28
CCNT1-204ENST00000551989 PPM1GO15355 546 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-204ENST00000551989 CENPQQ7L2Z9 268 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-204ENST00000551989 PUS7Q96PZ0 661 aaKnown RBP7.04□□□□□ -1.28
CCNT1-204ENST00000551989 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
CCNT1-204ENST00000551989 CABP2Q9NPB3 220 aa7.04□□□□□ -1.28
CCNT1-204ENST00000551989 CAMSAP1Q5T5Y3 1602 aa7.04□□□□□ -1.28
CCNT1-204ENST00000551989 ERVK-7P63135 1459 aa7.04□□□□□ -1.28
CCNT1-204ENST00000551989 ZNF521Q96K83 1311 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 HOXB3P14651 431 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-204ENST00000551989 RGL3Q3MIN7 710 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 BACH2Q9BYV9 841 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 CIZ1Q9ULV3 898 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-204ENST00000551989 BOLA1Q9Y3E2 137 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 POLR3AO14802 1390 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-204ENST00000551989 MLH3Q9UHC1 1453 aa7.03□□□□□ -1.28
CCNT1-204ENST00000551989 PPP2R1AP30153 589 aa7.02□□□□□ -1.29
CCNT1-204ENST00000551989 EMP3P54852 163 aa7.02□□□□□ -1.29
CCNT1-204ENST00000551989 EXOC6Q8TAG9 804 aa7.02□□□□□ -1.29
CCNT1-204ENST00000551989 NSD2O96028 1365 aa7.02□□□□□ -1.29
CCNT1-204ENST00000551989 CLTCQ00610 1675 aaKnown RBP7.02□□□□□ -1.29
CCNT1-204ENST00000551989 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
CCNT1-204ENST00000551989 PDE4AP27815 886 aa7.01□□□□□ -1.29
CCNT1-204ENST00000551989 CC2D1BQ5T0F9 858 aaKnown RBP7.01□□□□□ -1.29
CCNT1-204ENST00000551989 HS3ST6Q96QI5 342 aa7.01□□□□□ -1.29
CCNT1-204ENST00000551989 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
CCNT1-204ENST00000551989 ADGRB1O14514 1584 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 ADGRB2O60241 1585 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 GLI2P10070 1586 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 E9PSI1 815 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 DUSP27Q5VZP5 1158 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 TRMT2AQ8IZ69 625 aaKnown RBP7□□□□□ -1.29
CCNT1-204ENST00000551989 CGNL1Q0VF96 1302 aa7□□□□□ -1.29
CCNT1-204ENST00000551989 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 UGGT1Q9NYU2 1555 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 IQSEC2Q5JU85 1478 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 NEO1Q92859 1461 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 DEKP35659 375 aaKnown RBP6.99□□□□□ -1.29
CCNT1-204ENST00000551989 PLCB2Q00722 1185 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 TPRNQ4KMQ1 711 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 POGZQ7Z3K3 1410 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 KIF20BQ96Q89 1820 aa6.99□□□□□ -1.29
CCNT1-204ENST00000551989 PLEKHH1Q9ULM0 1364 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 ABCC3O15438 1527 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 PDE3AQ14432 1141 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 CRBNQ96SW2 442 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 ZFYVE9O95405 1425 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 ARHGAP31Q2M1Z3 1444 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 RICTORQ6R327 1708 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 MAPK8IP3Q9UPT6 1336 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 MED14O60244 1454 aa6.98□□□□□ -1.29
CCNT1-204ENST00000551989 FAM205CA6NFA0 338 aa6.97□□□□□ -1.29
CCNT1-204ENST00000551989 HOXB1P14653 301 aaPredicted RBP6.97□□□□□ -1.29
CCNT1-204ENST00000551989 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
CCNT1-204ENST00000551989 FAM161AQ3B820 660 aa6.97□□□□□ -1.29
CCNT1-204ENST00000551989 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
CCNT1-204ENST00000551989 CDCA7LQ96GN5 454 aa6.97□□□□□ -1.29
CCNT1-204ENST00000551989 CENPJQ9HC77 1338 aaPredicted RBP6.97□□□□□ -1.29
CCNT1-204ENST00000551989 NEXMIFQ5QGS0 1516 aa6.96□□□□□ -1.29
CCNT1-204ENST00000551989 SIGLEC1Q9BZZ2 1709 aa6.96□□□□□ -1.29
CCNT1-204ENST00000551989 NOS1P29475 1434 aa6.96□□□□□ -1.3
CCNT1-204ENST00000551989 CT47B1P0C2W7 299 aaPredicted RBP6.96□□□□□ -1.3
CCNT1-204ENST00000551989 CCDC27Q2M243 656 aa6.96□□□□□ -1.3
CCNT1-204ENST00000551989 PREX1Q8TCU6 1659 aa6.96□□□□□ -1.3
CCNT1-204ENST00000551989 CFAP65Q6ZU64 1925 aaKnown RBP6.95□□□□□ -1.3
CCNT1-204ENST00000551989 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
CCNT1-204ENST00000551989 KIF3BO15066 747 aa6.95□□□□□ -1.3
CCNT1-204ENST00000551989 CDC42BPGQ6DT37 1551 aa6.95□□□□□ -1.3
CCNT1-204ENST00000551989 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
CCNT1-204ENST00000551989 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
CCNT1-204ENST00000551989 MYO5BQ9ULV0 1848 aa6.94□□□□□ -1.3
CCNT1-204ENST00000551989 NPATQ14207 1427 aa6.94□□□□□ -1.3
CCNT1-204ENST00000551989 WDR63Q8IWG1 891 aa6.94□□□□□ -1.3
CCNT1-204ENST00000551989 AFAP1Q8N556 730 aa6.94□□□□□ -1.3
CCNT1-204ENST00000551989 RNF25Q96BH1 459 aaPredicted RBP6.94□□□□□ -1.3
CCNT1-204ENST00000551989 CFAP53Q96M91 514 aa6.94□□□□□ -1.3
CCNT1-204ENST00000551989 NSD3Q9BZ95 1437 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 G3V3G9 751 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 TMEM92Q6UXU6 159 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 RUNDC1Q96C34 613 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 C14orf93Q9H972 538 aaKnown RBP6.93□□□□□ -1.3
CCNT1-204ENST00000551989 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
CCNT1-204ENST00000551989 TULP4Q9NRJ4 1543 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 TMEM131LA2VDJ0 1609 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 SOX12O15370 315 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 MICALL2Q8IY33 904 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 MS4A4AQ96JQ5 239 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 SALL2Q9Y467 1007 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms