RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
SMARCD1-211ENST00000551497 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
SMARCD1-211ENST00000551497 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
SMARCD1-211ENST00000551497 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
SMARCD1-211ENST00000551497 USP6P35125 1406 aa21.11■□□□□ 0.97
SMARCD1-211ENST00000551497 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
SMARCD1-211ENST00000551497 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
SMARCD1-211ENST00000551497 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-211ENST00000551497 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
SMARCD1-211ENST00000551497 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
SMARCD1-211ENST00000551497 TTC21BQ7Z4L5 1316 aa21.08■□□□□ 0.97
SMARCD1-211ENST00000551497 LRP6O75581 1613 aa21.08■□□□□ 0.97
SMARCD1-211ENST00000551497 SSH2Q76I76 1423 aa21.08■□□□□ 0.97
SMARCD1-211ENST00000551497 ARHGEF10O15013 1369 aa21.08■□□□□ 0.96
SMARCD1-211ENST00000551497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMARCD1-211ENST00000551497 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
SMARCD1-211ENST00000551497 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
SMARCD1-211ENST00000551497 ALS2Q96Q42 1657 aa21.06■□□□□ 0.96
SMARCD1-211ENST00000551497 NINLQ9Y2I6 1382 aa21.06■□□□□ 0.96
SMARCD1-211ENST00000551497 COL22A1Q8NFW1 1626 aaPredicted RBP21.05■□□□□ 0.96
SMARCD1-211ENST00000551497 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
SMARCD1-211ENST00000551497 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
SMARCD1-211ENST00000551497 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
SMARCD1-211ENST00000551497 BRD4O60885 1362 aaPredicted RBP21.04■□□□□ 0.96
SMARCD1-211ENST00000551497 HAP1P54257 671 aaPredicted RBP21.03■□□□□ 0.96
SMARCD1-211ENST00000551497 NLRP6P59044 892 aa21.03■□□□□ 0.96
SMARCD1-211ENST00000551497 CARD14Q9BXL6 1004 aa21.03■□□□□ 0.96
SMARCD1-211ENST00000551497 NLRP13Q86W25 1043 aa21.02■□□□□ 0.96
SMARCD1-211ENST00000551497 NME9Q86XW9 330 aa21.02■□□□□ 0.96
SMARCD1-211ENST00000551497 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
SMARCD1-211ENST00000551497 C8orf37Q96NL8 207 aa21.01■□□□□ 0.95
SMARCD1-211ENST00000551497 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
SMARCD1-211ENST00000551497 MON2Q7Z3U7 1717 aa21.01■□□□□ 0.95
SMARCD1-211ENST00000551497 RGS17Q9UGC6 210 aaPredicted RBP21■□□□□ 0.95
SMARCD1-211ENST00000551497 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
SMARCD1-211ENST00000551497 PANK3Q9H999 370 aa20.99■□□□□ 0.95
SMARCD1-211ENST00000551497 MYOM1P52179 1685 aa20.99■□□□□ 0.95
SMARCD1-211ENST00000551497 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-211ENST00000551497 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
SMARCD1-211ENST00000551497 FAM83GA6ND36 823 aa20.97■□□□□ 0.95
SMARCD1-211ENST00000551497 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
SMARCD1-211ENST00000551497 GCP02774 474 aa20.96■□□□□ 0.95
SMARCD1-211ENST00000551497 ZC3H6P61129 1189 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-211ENST00000551497 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
SMARCD1-211ENST00000551497 USP19O94966 1318 aa20.96■□□□□ 0.95
SMARCD1-211ENST00000551497 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
SMARCD1-211ENST00000551497 FYB1O15117 783 aa20.94■□□□□ 0.94
SMARCD1-211ENST00000551497 AFF2P51816 1311 aa20.94■□□□□ 0.94
SMARCD1-211ENST00000551497 ABCA3Q99758 1704 aa20.93■□□□□ 0.94
SMARCD1-211ENST00000551497 SOX12O15370 315 aa20.93■□□□□ 0.94
SMARCD1-211ENST00000551497 USP31Q70CQ4 1352 aa20.93■□□□□ 0.94
SMARCD1-211ENST00000551497 CRYBG1Q9Y4K1 1723 aa20.92■□□□□ 0.94
SMARCD1-211ENST00000551497 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
SMARCD1-211ENST00000551497 CHRNA2Q15822 529 aa20.91■□□□□ 0.94
SMARCD1-211ENST00000551497 FNBP4Q8N3X1 1017 aaPredicted RBP20.91■□□□□ 0.94
SMARCD1-211ENST00000551497 NSD3Q9BZ95 1437 aa20.91■□□□□ 0.94
SMARCD1-211ENST00000551497 KIAA0232Q92628 1395 aa20.9■□□□□ 0.94
SMARCD1-211ENST00000551497 POTEAQ6S8J7 498 aa20.9■□□□□ 0.94
SMARCD1-211ENST00000551497 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
SMARCD1-211ENST00000551497 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
SMARCD1-211ENST00000551497 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
SMARCD1-211ENST00000551497 USP21Q9UK80 565 aa20.89■□□□□ 0.93
SMARCD1-211ENST00000551497 PHRF1Q9P1Y6 1649 aaKnown RBP20.89■□□□□ 0.93
SMARCD1-211ENST00000551497 FBLN1P23142 703 aa20.88■□□□□ 0.93
SMARCD1-211ENST00000551497 COG3Q96JB2 828 aa20.88■□□□□ 0.93
SMARCD1-211ENST00000551497 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
SMARCD1-211ENST00000551497 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
SMARCD1-211ENST00000551497 SLIT3O75094 1523 aa20.87■□□□□ 0.93
SMARCD1-211ENST00000551497 QTRT2Q9H974 415 aaKnown RBP20.86■□□□□ 0.93
SMARCD1-211ENST00000551497 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
SMARCD1-211ENST00000551497 ARHGEF25Q86VW2 580 aa20.85■□□□□ 0.93
SMARCD1-211ENST00000551497 BCL9LQ86UU0 1499 aa20.85■□□□□ 0.93
SMARCD1-211ENST00000551497 OVOS2A0A0J9YW53 1432 aa20.85■□□□□ 0.93
SMARCD1-211ENST00000551497 OVOS2Q6IE36 1432 aa20.85■□□□□ 0.93
SMARCD1-211ENST00000551497 CPDO75976 1380 aa20.85■□□□□ 0.93
SMARCD1-211ENST00000551497 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
SMARCD1-211ENST00000551497 PER1O15534 1290 aaPredicted RBP20.84■□□□□ 0.93
SMARCD1-211ENST00000551497 SLIT2O94813 1529 aa20.83■□□□□ 0.93
SMARCD1-211ENST00000551497 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.93
SMARCD1-211ENST00000551497 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
SMARCD1-211ENST00000551497 AXIN2Q9Y2T1 843 aa20.81■□□□□ 0.92
SMARCD1-211ENST00000551497 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
SMARCD1-211ENST00000551497 COL14A1Q05707 1796 aaKnown RBP20.8■□□□□ 0.92
SMARCD1-211ENST00000551497 NFAT5O94916 1531 aa20.8■□□□□ 0.92
SMARCD1-211ENST00000551497 TRPC5Q9UL62 973 aaPredicted RBP20.8■□□□□ 0.92
SMARCD1-211ENST00000551497 KIF20BQ96Q89 1820 aa20.79■□□□□ 0.92
SMARCD1-211ENST00000551497 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
SMARCD1-211ENST00000551497 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
SMARCD1-211ENST00000551497 PLCH1Q4KWH8 1693 aa20.78■□□□□ 0.92
SMARCD1-211ENST00000551497 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
SMARCD1-211ENST00000551497 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
SMARCD1-211ENST00000551497 EVA1CP58658 441 aa20.78■□□□□ 0.92
SMARCD1-211ENST00000551497 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.92
SMARCD1-211ENST00000551497 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
SMARCD1-211ENST00000551497 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.92
SMARCD1-211ENST00000551497 RXRBP28702 533 aa20.76■□□□□ 0.91
SMARCD1-211ENST00000551497 VPS72Q15906 364 aa20.76■□□□□ 0.91
SMARCD1-211ENST00000551497 CCDC9Q9Y3X0 531 aaKnown RBP20.76■□□□□ 0.91
SMARCD1-211ENST00000551497 ATRNO75882 1429 aa20.76■□□□□ 0.91
SMARCD1-211ENST00000551497 MAP3K19Q56UN5 1328 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms