RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 QRICH2Q9H0J4 1663 aa10.5□□□□□ -0.73
SMARCD1-210ENST00000551352 FAM83GA6ND36 823 aa10.5□□□□□ -0.73
SMARCD1-210ENST00000551352 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-210ENST00000551352 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
SMARCD1-210ENST00000551352 LRP5O75197 1615 aa10.49□□□□□ -0.73
SMARCD1-210ENST00000551352 VPS72Q15906 364 aa10.49□□□□□ -0.73
SMARCD1-210ENST00000551352 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
SMARCD1-210ENST00000551352 BLMP54132 1417 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-210ENST00000551352 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 DCAF11Q8TEB1 546 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 POGKQ9P215 609 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 WNK3Q9BYP7 1800 aa10.48□□□□□ -0.73
SMARCD1-210ENST00000551352 WASLO00401 505 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-210ENST00000551352 RREB1Q92766 1687 aa10.47□□□□□ -0.73
SMARCD1-210ENST00000551352 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
SMARCD1-210ENST00000551352 PSME1Q06323 249 aa10.46□□□□□ -0.73
SMARCD1-210ENST00000551352 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
SMARCD1-210ENST00000551352 TRPM1Q7Z4N2 1603 aa10.46□□□□□ -0.74
SMARCD1-210ENST00000551352 COL18A1P39060 1754 aa10.46□□□□□ -0.74
SMARCD1-210ENST00000551352 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
SMARCD1-210ENST00000551352 AKAP12Q02952 1782 aa10.45□□□□□ -0.74
SMARCD1-210ENST00000551352 NUP188Q5SRE5 1749 aa10.45□□□□□ -0.74
SMARCD1-210ENST00000551352 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
SMARCD1-210ENST00000551352 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-210ENST00000551352 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
SMARCD1-210ENST00000551352 BTG4Q9NY30 223 aa10.44□□□□□ -0.74
SMARCD1-210ENST00000551352 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
SMARCD1-210ENST00000551352 EIF3AQ14152 1382 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 FAM182BQ5T319 152 aa10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 NUDT16Q96DE0 195 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 PEAK1Q9H792 1746 aa10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 PARP4Q9UKK3 1724 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-210ENST00000551352 GPRASP1Q5JY77 1395 aa10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 KRT27Q7Z3Y8 459 aa10.42□□□□□ -0.74
SMARCD1-210ENST00000551352 CDK19Q9BWU1 502 aa10.41□□□□□ -0.74
SMARCD1-210ENST00000551352 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
SMARCD1-210ENST00000551352 LRRC37A3O60309 1634 aa10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 SLIT3O75094 1523 aa10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 CHRNA2Q15822 529 aa10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 NUTM2GQ5VZR2 741 aa10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
SMARCD1-210ENST00000551352 USP19O94966 1318 aa10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 ACEP12821 1306 aa10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 NGDNQ8NEJ9 315 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 DISP2A7MBM2 1401 aa10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
SMARCD1-210ENST00000551352 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 PPIP5K1Q6PFW1 1433 aa10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
SMARCD1-210ENST00000551352 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
SMARCD1-210ENST00000551352 PRDM11Q9NQV5 511 aa10.37□□□□□ -0.75
SMARCD1-210ENST00000551352 COL5A2P05997 1499 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 EN1Q05925 392 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 CPDO75976 1380 aa10.36□□□□□ -0.75
SMARCD1-210ENST00000551352 LTN1O94822 1766 aa10.35□□□□□ -0.75
SMARCD1-210ENST00000551352 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
SMARCD1-210ENST00000551352 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCD1-210ENST00000551352 CABP2Q9NPB3 220 aa10.35□□□□□ -0.75
SMARCD1-210ENST00000551352 USP6P35125 1406 aa10.34□□□□□ -0.75
SMARCD1-210ENST00000551352 A0A0G2JS52 829 aa10.34□□□□□ -0.75
SMARCD1-210ENST00000551352 MYT1Q01538 1121 aa10.34□□□□□ -0.75
SMARCD1-210ENST00000551352 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
SMARCD1-210ENST00000551352 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
SMARCD1-210ENST00000551352 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 NFAT5O94916 1531 aa10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 EZH2Q15910 746 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 LARP1Q6PKG0 1096 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 MIER1Q8N108 512 aa10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 CASZ1Q86V15 1759 aa10.33□□□□□ -0.76
SMARCD1-210ENST00000551352 BAG6P46379 1132 aa10.32□□□□□ -0.76
SMARCD1-210ENST00000551352 CAMKK2Q96RR4 588 aa10.32□□□□□ -0.76
SMARCD1-210ENST00000551352 TRIM37O94972 964 aa10.31□□□□□ -0.76
SMARCD1-210ENST00000551352 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-210ENST00000551352 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
SMARCD1-210ENST00000551352 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
SMARCD1-210ENST00000551352 USP47Q96K76 1375 aa10.3□□□□□ -0.76
SMARCD1-210ENST00000551352 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-210ENST00000551352 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
SMARCD1-210ENST00000551352 USP35Q9P2H5 1018 aa10.3□□□□□ -0.76
SMARCD1-210ENST00000551352 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
SMARCD1-210ENST00000551352 GCP02774 474 aa10.29□□□□□ -0.76
SMARCD1-210ENST00000551352 SRPK2P78362 688 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-210ENST00000551352 DDX10Q13206 875 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms