RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 THEMISQ8N1K5 641 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-208ENST00000551338 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
RAB5C-208ENST00000551338 TBX22Q9Y458 520 aa15.2■□□□□ 0.02
RAB5C-208ENST00000551338 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
RAB5C-208ENST00000551338 RUNDC1Q96C34 613 aa15.19■□□□□ 0.02
RAB5C-208ENST00000551338 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
RAB5C-208ENST00000551338 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
RAB5C-208ENST00000551338 LRRC7Q96NW7 1537 aa15.17■□□□□ 0.02
RAB5C-208ENST00000551338 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
RAB5C-208ENST00000551338 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
RAB5C-208ENST00000551338 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
RAB5C-208ENST00000551338 CDK12Q9NYV4 1490 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-208ENST00000551338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB5C-208ENST00000551338 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-208ENST00000551338 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
RAB5C-208ENST00000551338 MARF1Q9Y4F3 1742 aaKnown RBP15.16■□□□□ 0.02
RAB5C-208ENST00000551338 USP54Q70EL1 1684 aa15.16■□□□□ 0.02
RAB5C-208ENST00000551338 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
RAB5C-208ENST00000551338 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
RAB5C-208ENST00000551338 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-208ENST00000551338 AMOTL2Q9Y2J4 779 aa15.15■□□□□ 0.02
RAB5C-208ENST00000551338 NME9Q86XW9 330 aa15.14■□□□□ 0.01
RAB5C-208ENST00000551338 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
RAB5C-208ENST00000551338 AATKQ6ZMQ8 1374 aa15.13■□□□□ 0.01
RAB5C-208ENST00000551338 E9PSI1 815 aa15.13■□□□□ 0.01
RAB5C-208ENST00000551338 USP6P35125 1406 aa15.13■□□□□ 0.01
RAB5C-208ENST00000551338 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
RAB5C-208ENST00000551338 OVOS2A0A0J9YW53 1432 aa15.12■□□□□ 0.01
RAB5C-208ENST00000551338 OVOS2Q6IE36 1432 aa15.12■□□□□ 0.01
RAB5C-208ENST00000551338 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-208ENST00000551338 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB5C-208ENST00000551338 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
RAB5C-208ENST00000551338 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
RAB5C-208ENST00000551338 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
RAB5C-208ENST00000551338 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
RAB5C-208ENST00000551338 EXOC6Q8TAG9 804 aa15.11■□□□□ 0.01
RAB5C-208ENST00000551338 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
RAB5C-208ENST00000551338 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
RAB5C-208ENST00000551338 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
RAB5C-208ENST00000551338 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
RAB5C-208ENST00000551338 RGPD1P0DJD0 1748 aa15.1■□□□□ 0.01
RAB5C-208ENST00000551338 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
RAB5C-208ENST00000551338 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
RAB5C-208ENST00000551338 NWD1Q149M9 1564 aa15.1■□□□□ 0.01
RAB5C-208ENST00000551338 ANKARQ7Z5J8 1434 aa15.09■□□□□ 0.01
RAB5C-208ENST00000551338 PLIN1O60240 522 aa15.09■□□□□ 0.01
RAB5C-208ENST00000551338 DIAPH1O60610 1272 aaKnown RBP15.09■□□□□ 0.01
RAB5C-208ENST00000551338 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-208ENST00000551338 ACEP12821 1306 aa15.09■□□□□ 0.01
RAB5C-208ENST00000551338 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
RAB5C-208ENST00000551338 FBLN1P23142 703 aa15.08■□□□□ 0
RAB5C-208ENST00000551338 CCDC136Q96JN2 1154 aa15.08■□□□□ 0
RAB5C-208ENST00000551338 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
RAB5C-208ENST00000551338 WDR63Q8IWG1 891 aa15.07■□□□□ 0
RAB5C-208ENST00000551338 CRBNQ96SW2 442 aa15.07■□□□□ 0
RAB5C-208ENST00000551338 NUTM2FA1L443 756 aa15.06■□□□□ 0
RAB5C-208ENST00000551338 KCNA6P17658 529 aa15.06■□□□□ 0
RAB5C-208ENST00000551338 NEUROD2Q15784 382 aa15.06■□□□□ 0
RAB5C-208ENST00000551338 COG3Q96JB2 828 aa15.06■□□□□ 0
RAB5C-208ENST00000551338 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
RAB5C-208ENST00000551338 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
RAB5C-208ENST00000551338 USP31Q70CQ4 1352 aa15.04■□□□□ -0
RAB5C-208ENST00000551338 C20orf194Q5TEA3 1177 aa15.04■□□□□ -0
RAB5C-208ENST00000551338 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
RAB5C-208ENST00000551338 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
RAB5C-208ENST00000551338 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
RAB5C-208ENST00000551338 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
RAB5C-208ENST00000551338 TTC21AQ8NDW8 1320 aa15.02■□□□□ -0
RAB5C-208ENST00000551338 TRIM35Q9UPQ4 493 aa15.02■□□□□ -0
RAB5C-208ENST00000551338 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
RAB5C-208ENST00000551338 LTN1O94822 1766 aa15.01□□□□□ -0.01
RAB5C-208ENST00000551338 IL13P35225 146 aa15.01□□□□□ -0.01
RAB5C-208ENST00000551338 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-208ENST00000551338 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
RAB5C-208ENST00000551338 FCHSD2O94868 740 aa15□□□□□ -0.01
RAB5C-208ENST00000551338 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
RAB5C-208ENST00000551338 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
RAB5C-208ENST00000551338 PNNQ9H307 717 aaKnown RBP15□□□□□ -0.01
RAB5C-208ENST00000551338 BCAR3O75815 825 aa14.99□□□□□ -0.01
RAB5C-208ENST00000551338 PRKAR2BP31323 418 aa14.99□□□□□ -0.01
RAB5C-208ENST00000551338 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
RAB5C-208ENST00000551338 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
RAB5C-208ENST00000551338 IL16Q14005 1332 aa14.97□□□□□ -0.01
RAB5C-208ENST00000551338 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
RAB5C-208ENST00000551338 HMOX1P09601 288 aa14.96□□□□□ -0.01
RAB5C-208ENST00000551338 RIPK4P57078 832 aa14.96□□□□□ -0.01
RAB5C-208ENST00000551338 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
RAB5C-208ENST00000551338 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
RAB5C-208ENST00000551338 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
RAB5C-208ENST00000551338 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
RAB5C-208ENST00000551338 KIF1AQ12756 1690 aa14.95□□□□□ -0.02
RAB5C-208ENST00000551338 NFE2L2Q16236 605 aa14.94□□□□□ -0.02
RAB5C-208ENST00000551338 EIF4A2Q14240 407 aaKnown RBP14.93□□□□□ -0.02
RAB5C-208ENST00000551338 TSR2Q969E8 191 aaKnown RBP14.93□□□□□ -0.02
RAB5C-208ENST00000551338 PHACTR3Q96KR7 559 aa14.93□□□□□ -0.02
RAB5C-208ENST00000551338 PHRF1Q9P1Y6 1649 aaKnown RBP14.92□□□□□ -0.02
RAB5C-208ENST00000551338 SBNO1A3KN83 1393 aa14.92□□□□□ -0.02
RAB5C-208ENST00000551338 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
RAB5C-208ENST00000551338 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
RAB5C-208ENST00000551338 FLT4P35916 1363 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms