RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 FOXO3O43524 673 aa16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 PSME1Q06323 249 aa16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-213ENST00000551269 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-213ENST00000551269 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-213ENST00000551269 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-213ENST00000551269 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-213ENST00000551269 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
PRPF40B-213ENST00000551269 LTN1O94822 1766 aa16.11■□□□□ 0.17
PRPF40B-213ENST00000551269 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-213ENST00000551269 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
PRPF40B-213ENST00000551269 FBXO41Q8TF61 875 aa16.1■□□□□ 0.17
PRPF40B-213ENST00000551269 PANK3Q9H999 370 aa16.1■□□□□ 0.17
PRPF40B-213ENST00000551269 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-213ENST00000551269 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
PRPF40B-213ENST00000551269 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
PRPF40B-213ENST00000551269 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
PRPF40B-213ENST00000551269 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 LMOD2Q6P5Q4 547 aa16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-213ENST00000551269 NSD2O96028 1365 aa16.06■□□□□ 0.16
PRPF40B-213ENST00000551269 KNSTRNQ9Y448 316 aa16.06■□□□□ 0.16
PRPF40B-213ENST00000551269 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
PRPF40B-213ENST00000551269 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
PRPF40B-213ENST00000551269 SLIT3O75094 1523 aa16.04■□□□□ 0.16
PRPF40B-213ENST00000551269 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
PRPF40B-213ENST00000551269 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
PRPF40B-213ENST00000551269 JCADQ9P266 1359 aa16.04■□□□□ 0.16
PRPF40B-213ENST00000551269 ABTB2Q8N961 1025 aa16.04■□□□□ 0.16
PRPF40B-213ENST00000551269 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
PRPF40B-213ENST00000551269 HSPA1LP34931 641 aa16.03■□□□□ 0.16
PRPF40B-213ENST00000551269 NME9Q86XW9 330 aa16.02■□□□□ 0.16
PRPF40B-213ENST00000551269 CARD14Q9BXL6 1004 aa16.02■□□□□ 0.16
PRPF40B-213ENST00000551269 PLCH1Q4KWH8 1693 aa16.02■□□□□ 0.15
PRPF40B-213ENST00000551269 USP31Q70CQ4 1352 aa16■□□□□ 0.15
PRPF40B-213ENST00000551269 RGPD5Q99666 1765 aa16■□□□□ 0.15
PRPF40B-213ENST00000551269 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
PRPF40B-213ENST00000551269 NLRP6P59044 892 aa16■□□□□ 0.15
PRPF40B-213ENST00000551269 NLRP13Q86W25 1043 aa16■□□□□ 0.15
PRPF40B-213ENST00000551269 COG3Q96JB2 828 aa16■□□□□ 0.15
PRPF40B-213ENST00000551269 NFAT5O94916 1531 aa15.99■□□□□ 0.15
PRPF40B-213ENST00000551269 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
PRPF40B-213ENST00000551269 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
PRPF40B-213ENST00000551269 GGNBP2Q9H3C7 697 aa15.99■□□□□ 0.15
PRPF40B-213ENST00000551269 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
PRPF40B-213ENST00000551269 COL14A1Q05707 1796 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-213ENST00000551269 USP19O94966 1318 aa15.97■□□□□ 0.15
PRPF40B-213ENST00000551269 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
PRPF40B-213ENST00000551269 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
PRPF40B-213ENST00000551269 FAM208AQ9UK61 1670 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-213ENST00000551269 FYB1O15117 783 aa15.96■□□□□ 0.15
PRPF40B-213ENST00000551269 PER1O15534 1290 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-213ENST00000551269 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-213ENST00000551269 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-213ENST00000551269 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
PRPF40B-213ENST00000551269 ABCC6O95255 1503 aa15.95■□□□□ 0.14
PRPF40B-213ENST00000551269 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
PRPF40B-213ENST00000551269 SOX12O15370 315 aa15.94■□□□□ 0.14
PRPF40B-213ENST00000551269 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
PRPF40B-213ENST00000551269 KCNH5Q8NCM2 988 aa15.94■□□□□ 0.14
PRPF40B-213ENST00000551269 PEAK1Q9H792 1746 aa15.94■□□□□ 0.14
PRPF40B-213ENST00000551269 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
PRPF40B-213ENST00000551269 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-213ENST00000551269 LRP6O75581 1613 aa15.93■□□□□ 0.14
PRPF40B-213ENST00000551269 COL18A1P39060 1754 aa15.92■□□□□ 0.14
PRPF40B-213ENST00000551269 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
PRPF40B-213ENST00000551269 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
PRPF40B-213ENST00000551269 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-213ENST00000551269 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-213ENST00000551269 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-213ENST00000551269 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
PRPF40B-213ENST00000551269 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
PRPF40B-213ENST00000551269 AATKQ6ZMQ8 1374 aa15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 ANP32CO43423 234 aa15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 GCP02774 474 aa15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 MEX3CQ5U5Q3 659 aaKnown RBP15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 RGPD2P0DJD1 1756 aa15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
PRPF40B-213ENST00000551269 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
PRPF40B-213ENST00000551269 CPDO75976 1380 aa15.88■□□□□ 0.13
PRPF40B-213ENST00000551269 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
PRPF40B-213ENST00000551269 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
PRPF40B-213ENST00000551269 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-213ENST00000551269 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
PRPF40B-213ENST00000551269 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
PRPF40B-213ENST00000551269 ZC3H6P61129 1189 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-213ENST00000551269 RALBP1Q15311 655 aa15.86■□□□□ 0.13
PRPF40B-213ENST00000551269 ILDR1Q86SU0 546 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-213ENST00000551269 FLT4P35916 1363 aa15.85■□□□□ 0.13
PRPF40B-213ENST00000551269 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
PRPF40B-213ENST00000551269 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-213ENST00000551269 AMPHP49418 695 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms