RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 GNL2Q13823 731 aaKnown RBP14.36□□□□□ -0.11
LGR5-206ENST00000550851 G3BP1Q13283 466 aaKnown RBP eCLIP14.36□□□□□ -0.11
LGR5-206ENST00000550851 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
LGR5-206ENST00000550851 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
LGR5-206ENST00000550851 ITSN2Q9NZM3 1697 aa14.35□□□□□ -0.11
LGR5-206ENST00000550851 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
LGR5-206ENST00000550851 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
LGR5-206ENST00000550851 PZPP20742 1482 aa14.34□□□□□ -0.11
LGR5-206ENST00000550851 FAM177BA6PVY3 158 aa14.34□□□□□ -0.11
LGR5-206ENST00000550851 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
LGR5-206ENST00000550851 ZNF518AQ6AHZ1 1483 aa14.33□□□□□ -0.11
LGR5-206ENST00000550851 MVPQ14764 893 aaKnown RBP14.33□□□□□ -0.11
LGR5-206ENST00000550851 PBRM1Q86U86 1689 aa14.33□□□□□ -0.11
LGR5-206ENST00000550851 REC8O95072 547 aa14.33□□□□□ -0.12
LGR5-206ENST00000550851 FYB1O15117 783 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 TATP17735 454 aaPredicted RBP14.32□□□□□ -0.12
LGR5-206ENST00000550851 DUSP27Q5VZP5 1158 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 NEUROD6Q96NK8 337 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 PHF8Q9UPP1 1060 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
LGR5-206ENST00000550851 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
LGR5-206ENST00000550851 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
LGR5-206ENST00000550851 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 RALGAPBQ86X10 1494 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 MSH5O43196 834 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 GNAI3P08754 354 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 TARBP1Q13395 1621 aaKnown RBP14.31□□□□□ -0.12
LGR5-206ENST00000550851 FAM83GA6ND36 823 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 MYL6BP14649 208 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
LGR5-206ENST00000550851 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
LGR5-206ENST00000550851 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
LGR5-206ENST00000550851 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
LGR5-206ENST00000550851 ACEP12821 1306 aa14.3□□□□□ -0.12
LGR5-206ENST00000550851 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
LGR5-206ENST00000550851 CFAP65Q6ZU64 1925 aaKnown RBP14.3□□□□□ -0.12
LGR5-206ENST00000550851 AAMPQ13685 434 aa14.29□□□□□ -0.12
LGR5-206ENST00000550851 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
LGR5-206ENST00000550851 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
LGR5-206ENST00000550851 HSP90AB2PQ58FF8 381 aa14.29□□□□□ -0.12
LGR5-206ENST00000550851 TNRQ92752 1358 aa14.28□□□□□ -0.12
LGR5-206ENST00000550851 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
LGR5-206ENST00000550851 BACH2Q9BYV9 841 aa14.28□□□□□ -0.12
LGR5-206ENST00000550851 CLASRPQ8N2M8 674 aaKnown RBP14.28□□□□□ -0.12
LGR5-206ENST00000550851 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
LGR5-206ENST00000550851 GNAI2P04899 355 aa14.27□□□□□ -0.12
LGR5-206ENST00000550851 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.12
LGR5-206ENST00000550851 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.12
LGR5-206ENST00000550851 ABCC10Q5T3U5 1492 aa14.27□□□□□ -0.13
LGR5-206ENST00000550851 SIL1Q9H173 461 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
LGR5-206ENST00000550851 APPP05067 770 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 CABP4P57796 275 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 RUFY2Q8WXA3 655 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
LGR5-206ENST00000550851 BTBD11A6QL63 1104 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 GNAT3A8MTJ3 354 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 F6X3S4 739 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
LGR5-206ENST00000550851 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
LGR5-206ENST00000550851 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
LGR5-206ENST00000550851 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
LGR5-206ENST00000550851 CDC45O75419 566 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
LGR5-206ENST00000550851 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 GOLGA6L3A6NEY3 463 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 G3V3G9 751 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 PIP4K2BP78356 416 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
LGR5-206ENST00000550851 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
LGR5-206ENST00000550851 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
LGR5-206ENST00000550851 UHRF1BP1LA0JNW5 1464 aa14.24□□□□□ -0.13
LGR5-206ENST00000550851 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
LGR5-206ENST00000550851 SHANK2Q9UPX8 1470 aa14.23□□□□□ -0.13
LGR5-206ENST00000550851 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
LGR5-206ENST00000550851 TRIM27P14373 513 aa14.23□□□□□ -0.13
LGR5-206ENST00000550851 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
LGR5-206ENST00000550851 ERC2O15083 957 aa14.22□□□□□ -0.13
LGR5-206ENST00000550851 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
LGR5-206ENST00000550851 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
LGR5-206ENST00000550851 KAT6BQ8WYB5 2073 aa14.22□□□□□ -0.13
LGR5-206ENST00000550851 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
LGR5-206ENST00000550851 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
LGR5-206ENST00000550851 SPG7Q9UQ90 795 aa14.22□□□□□ -0.13
LGR5-206ENST00000550851 MAP4K4O95819 1239 aaPredicted RBP14.22□□□□□ -0.13
LGR5-206ENST00000550851 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.13
LGR5-206ENST00000550851 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.13
LGR5-206ENST00000550851 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
LGR5-206ENST00000550851 FAM184AQ8NB25 1140 aa14.21□□□□□ -0.13
LGR5-206ENST00000550851 NKTRP30414 1462 aaKnown RBP14.21□□□□□ -0.13
LGR5-206ENST00000550851 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
LGR5-206ENST00000550851 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
LGR5-206ENST00000550851 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
LGR5-206ENST00000550851 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
LGR5-206ENST00000550851 RIMS2Q9UQ26 1411 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms