RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 JCADQ9P266 1359 aa18.72■□□□□ 0.59
ERBB3-215ENST00000550828 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
ERBB3-215ENST00000550828 CARD14Q9BXL6 1004 aa18.72■□□□□ 0.59
ERBB3-215ENST00000550828 NGDNQ8NEJ9 315 aaKnown RBP18.7■□□□□ 0.58
ERBB3-215ENST00000550828 CRYBG1Q9Y4K1 1723 aa18.7■□□□□ 0.58
ERBB3-215ENST00000550828 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
ERBB3-215ENST00000550828 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
ERBB3-215ENST00000550828 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
ERBB3-215ENST00000550828 PANK3Q9H999 370 aa18.69■□□□□ 0.58
ERBB3-215ENST00000550828 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
ERBB3-215ENST00000550828 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
ERBB3-215ENST00000550828 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
ERBB3-215ENST00000550828 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
ERBB3-215ENST00000550828 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
ERBB3-215ENST00000550828 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
ERBB3-215ENST00000550828 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
ERBB3-215ENST00000550828 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
ERBB3-215ENST00000550828 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
ERBB3-215ENST00000550828 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
ERBB3-215ENST00000550828 PSME1Q06323 249 aa18.64■□□□□ 0.57
ERBB3-215ENST00000550828 SPATA31A6Q5VVP1 1343 aa18.64■□□□□ 0.57
ERBB3-215ENST00000550828 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
ERBB3-215ENST00000550828 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
ERBB3-215ENST00000550828 TNS3Q68CZ2 1445 aa18.64■□□□□ 0.57
ERBB3-215ENST00000550828 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
ERBB3-215ENST00000550828 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
ERBB3-215ENST00000550828 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
ERBB3-215ENST00000550828 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
ERBB3-215ENST00000550828 ZNF772Q68DY9 489 aaPredicted RBP18.62■□□□□ 0.57
ERBB3-215ENST00000550828 ZRANB1Q9UGI0 708 aa18.62■□□□□ 0.57
ERBB3-215ENST00000550828 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
ERBB3-215ENST00000550828 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
ERBB3-215ENST00000550828 NME9Q86XW9 330 aa18.6■□□□□ 0.57
ERBB3-215ENST00000550828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
ERBB3-215ENST00000550828 LRP6O75581 1613 aa18.6■□□□□ 0.57
ERBB3-215ENST00000550828 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
ERBB3-215ENST00000550828 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
ERBB3-215ENST00000550828 TTC21AQ8NDW8 1320 aa18.59■□□□□ 0.57
ERBB3-215ENST00000550828 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
ERBB3-215ENST00000550828 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
ERBB3-215ENST00000550828 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
ERBB3-215ENST00000550828 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
ERBB3-215ENST00000550828 FYB1O15117 783 aa18.57■□□□□ 0.56
ERBB3-215ENST00000550828 UPF1Q92900 1129 aaKnown RBP eCLIP18.57■□□□□ 0.56
ERBB3-215ENST00000550828 SLIT3O75094 1523 aa18.57■□□□□ 0.56
ERBB3-215ENST00000550828 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
ERBB3-215ENST00000550828 NUTM2GQ5VZR2 741 aa18.56■□□□□ 0.56
ERBB3-215ENST00000550828 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
ERBB3-215ENST00000550828 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
ERBB3-215ENST00000550828 NFAT5O94916 1531 aa18.54■□□□□ 0.56
ERBB3-215ENST00000550828 MAP2P11137 1827 aaKnown RBP18.54■□□□□ 0.56
ERBB3-215ENST00000550828 LTN1O94822 1766 aa18.54■□□□□ 0.56
ERBB3-215ENST00000550828 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
ERBB3-215ENST00000550828 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
ERBB3-215ENST00000550828 USP19O94966 1318 aa18.53■□□□□ 0.56
ERBB3-215ENST00000550828 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
ERBB3-215ENST00000550828 ABTB2Q8N961 1025 aa18.53■□□□□ 0.56
ERBB3-215ENST00000550828 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
ERBB3-215ENST00000550828 LRRC59Q96AG4 307 aaKnown RBP18.52■□□□□ 0.56
ERBB3-215ENST00000550828 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
ERBB3-215ENST00000550828 NSD2O96028 1365 aa18.51■□□□□ 0.55
ERBB3-215ENST00000550828 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
ERBB3-215ENST00000550828 RXRBP28702 533 aa18.5■□□□□ 0.55
ERBB3-215ENST00000550828 NLRP6P59044 892 aa18.5■□□□□ 0.55
ERBB3-215ENST00000550828 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
ERBB3-215ENST00000550828 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
ERBB3-215ENST00000550828 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
ERBB3-215ENST00000550828 COL18A1P39060 1754 aa18.49■□□□□ 0.55
ERBB3-215ENST00000550828 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
ERBB3-215ENST00000550828 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
ERBB3-215ENST00000550828 FBLN1P23142 703 aa18.47■□□□□ 0.55
ERBB3-215ENST00000550828 NLRP13Q86W25 1043 aa18.47■□□□□ 0.55
ERBB3-215ENST00000550828 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
ERBB3-215ENST00000550828 COG3Q96JB2 828 aa18.45■□□□□ 0.54
ERBB3-215ENST00000550828 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
ERBB3-215ENST00000550828 PLCH1Q4KWH8 1693 aa18.44■□□□□ 0.54
ERBB3-215ENST00000550828 SOX12O15370 315 aa18.43■□□□□ 0.54
ERBB3-215ENST00000550828 GCP02774 474 aa18.43■□□□□ 0.54
ERBB3-215ENST00000550828 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
ERBB3-215ENST00000550828 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
ERBB3-215ENST00000550828 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
ERBB3-215ENST00000550828 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
ERBB3-215ENST00000550828 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
ERBB3-215ENST00000550828 AFF2P51816 1311 aa18.4■□□□□ 0.54
ERBB3-215ENST00000550828 CPDO75976 1380 aa18.4■□□□□ 0.54
ERBB3-215ENST00000550828 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
ERBB3-215ENST00000550828 RGPD2P0DJD1 1756 aa18.4■□□□□ 0.54
ERBB3-215ENST00000550828 NUTM2BA6NNL0 878 aaPredicted RBP18.39■□□□□ 0.53
ERBB3-215ENST00000550828 NUTM2EB1AL46 878 aaPredicted RBP18.39■□□□□ 0.53
ERBB3-215ENST00000550828 NUTM2AQ8IVF1 878 aaPredicted RBP18.39■□□□□ 0.53
ERBB3-215ENST00000550828 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
ERBB3-215ENST00000550828 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.53
ERBB3-215ENST00000550828 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
ERBB3-215ENST00000550828 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
ERBB3-215ENST00000550828 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
ERBB3-215ENST00000550828 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
ERBB3-215ENST00000550828 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
ERBB3-215ENST00000550828 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
ERBB3-215ENST00000550828 RGS12O14924 1447 aa18.37■□□□□ 0.53
ERBB3-215ENST00000550828 ABCC6O95255 1503 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms