RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-210ENST00000550661 ZNF142P52746 1687 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-210ENST00000550661 TNRQ92752 1358 aa8.73□□□□□ -1.01
PTPRR-210ENST00000550661 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
PTPRR-210ENST00000550661 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
PTPRR-210ENST00000550661 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
PTPRR-210ENST00000550661 MPHOSPH9Q99550 1183 aa8.73□□□□□ -1.01
PTPRR-210ENST00000550661 DHX57Q6P158 1386 aaKnown RBP8.73□□□□□ -1.01
PTPRR-210ENST00000550661 ADGRB3O60242 1522 aa8.72□□□□□ -1.01
PTPRR-210ENST00000550661 FOSBP53539 338 aa8.72□□□□□ -1.01
PTPRR-210ENST00000550661 PDIA6Q15084 440 aa8.72□□□□□ -1.01
PTPRR-210ENST00000550661 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
PTPRR-210ENST00000550661 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
PTPRR-210ENST00000550661 CEP170BQ9Y4F5 1589 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-210ENST00000550661 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
PTPRR-210ENST00000550661 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.01
PTPRR-210ENST00000550661 PLA2R1Q13018 1463 aa8.71□□□□□ -1.01
PTPRR-210ENST00000550661 CCDC144AA2RUR9 1427 aa8.71□□□□□ -1.02
PTPRR-210ENST00000550661 A2ML1A8K2U0 1454 aa8.7□□□□□ -1.02
PTPRR-210ENST00000550661 NEURL4Q96JN8 1562 aa8.7□□□□□ -1.02
PTPRR-210ENST00000550661 CLTCL1P53675 1640 aa8.7□□□□□ -1.02
PTPRR-210ENST00000550661 CEBPAP49715 358 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-210ENST00000550661 ARHGEF1Q92888 912 aaKnown RBP8.7□□□□□ -1.02
PTPRR-210ENST00000550661 UGGT1Q9NYU2 1555 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 PBX2P40425 430 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 FBXO31Q5XUX0 539 aaPredicted RBP8.69□□□□□ -1.02
PTPRR-210ENST00000550661 DDX12PQ92771 950 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 SLC52A1Q9NWF4 448 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 ANKRD30BQ9BXX2 1392 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 LMTK3Q96Q04 1460 aa8.69□□□□□ -1.02
PTPRR-210ENST00000550661 PHF14O94880 888 aa8.68□□□□□ -1.02
PTPRR-210ENST00000550661 POTEEQ6S8J3 1075 aa8.68□□□□□ -1.02
PTPRR-210ENST00000550661 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
PTPRR-210ENST00000550661 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
PTPRR-210ENST00000550661 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
PTPRR-210ENST00000550661 PTGER2P43116 358 aa8.67□□□□□ -1.02
PTPRR-210ENST00000550661 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
PTPRR-210ENST00000550661 UBR1Q8IWV7 1749 aa8.66□□□□□ -1.02
PTPRR-210ENST00000550661 TMEM131LA2VDJ0 1609 aa8.66□□□□□ -1.02
PTPRR-210ENST00000550661 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
PTPRR-210ENST00000550661 EPAS1Q99814 870 aa8.66□□□□□ -1.02
PTPRR-210ENST00000550661 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
PTPRR-210ENST00000550661 SLIT1O75093 1534 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 SPATA31E1Q6ZUB1 1445 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 PSEN2P49810 448 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 KCNK17Q96T54 332 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
PTPRR-210ENST00000550661 ARHGAP23Q9P227 1491 aa8.64□□□□□ -1.03
PTPRR-210ENST00000550661 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRR-210ENST00000550661 IDI1Q13907 227 aa8.64□□□□□ -1.03
PTPRR-210ENST00000550661 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
PTPRR-210ENST00000550661 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
PTPRR-210ENST00000550661 SETD1BQ9UPS6 1966 aaKnown RBP8.64□□□□□ -1.03
PTPRR-210ENST00000550661 KIF1BO60333 1816 aa8.64□□□□□ -1.03
PTPRR-210ENST00000550661 PTPREP23469 700 aa8.63□□□□□ -1.03
PTPRR-210ENST00000550661 NBR1Q14596 966 aa8.63□□□□□ -1.03
PTPRR-210ENST00000550661 NEXMIFQ5QGS0 1516 aa8.63□□□□□ -1.03
PTPRR-210ENST00000550661 ZFYVE9O95405 1425 aa8.63□□□□□ -1.03
PTPRR-210ENST00000550661 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
PTPRR-210ENST00000550661 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
PTPRR-210ENST00000550661 MYOM2P54296 1465 aa8.62□□□□□ -1.03
PTPRR-210ENST00000550661 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
PTPRR-210ENST00000550661 THEMISQ8N1K5 641 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-210ENST00000550661 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-210ENST00000550661 SCAF11Q99590 1463 aaKnown RBP8.61□□□□□ -1.03
PTPRR-210ENST00000550661 RIMS2Q9UQ26 1411 aa8.61□□□□□ -1.03
PTPRR-210ENST00000550661 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
PTPRR-210ENST00000550661 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
PTPRR-210ENST00000550661 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
PTPRR-210ENST00000550661 RPGRIP1LQ68CZ1 1315 aa8.59□□□□□ -1.03
PTPRR-210ENST00000550661 MED14O60244 1454 aa8.59□□□□□ -1.03
PTPRR-210ENST00000550661 PPLO60437 1756 aa8.59□□□□□ -1.03
PTPRR-210ENST00000550661 CFAP65Q6ZU64 1925 aaKnown RBP8.59□□□□□ -1.03
PTPRR-210ENST00000550661 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-210ENST00000550661 NRXN1Q9ULB1 1477 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 DIP2AQ14689 1571 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 SEMA3EO15041 775 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 MAP3K7O43318 606 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-210ENST00000550661 ZNF326Q5BKZ1 582 aaKnown RBP8.58□□□□□ -1.04
PTPRR-210ENST00000550661 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPRR-210ENST00000550661 MYO5BQ9ULV0 1848 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 TONSLQ96HA7 1378 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 PLEKHG1Q9ULL1 1385 aa8.58□□□□□ -1.04
PTPRR-210ENST00000550661 PIK3C2GO75747 1445 aa8.57□□□□□ -1.04
PTPRR-210ENST00000550661 OSBPP22059 807 aa8.57□□□□□ -1.04
PTPRR-210ENST00000550661 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
PTPRR-210ENST00000550661 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
PTPRR-210ENST00000550661 LAMC1P11047 1609 aa8.57□□□□□ -1.04
PTPRR-210ENST00000550661 IQGAP1P46940 1657 aa8.56□□□□□ -1.04
PTPRR-210ENST00000550661 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-210ENST00000550661 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
PTPRR-210ENST00000550661 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-210ENST00000550661 PRIM1P49642 420 aaKnown RBP8.56□□□□□ -1.04
PTPRR-210ENST00000550661 HDGFP51858 240 aaKnown RBP8.56□□□□□ -1.04
PTPRR-210ENST00000550661 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms