RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 AP1ARQ63HQ0 302 aa10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
PPFIA2-220ENST00000550584 ZKSCAN1P17029 563 aaPredicted RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 CENPHQ9H3R5 247 aa10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 MKRN1Q9UHC7 482 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 SPATA24Q86W54 205 aa10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 GCC1Q96CN9 775 aa10.4□□□□□ -0.74
PPFIA2-220ENST00000550584 PLIN1O60240 522 aa10.4□□□□□ -0.75
PPFIA2-220ENST00000550584 LMAN1P49257 510 aa10.4□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC38Q502W7 563 aa10.4□□□□□ -0.75
PPFIA2-220ENST00000550584 LRSAM1Q6UWE0 723 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 TACO1Q9BSH4 297 aaKnown RBP10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 FILIP1LQ4L180 1135 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC83Q8IWF9 413 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 GORABQ5T7V8 394 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 SMARCC1Q92922 1105 aaPredicted RBP10.39□□□□□ -0.75
PPFIA2-220ENST00000550584 CEP135Q66GS9 1140 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 NBPF11Q86T75 865 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC196A0A1B0GTZ2 297 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 HSPA4P34932 840 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 CEP112Q8N8E3 955 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
PPFIA2-220ENST00000550584 KINO60870 393 aaKnown RBP10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 CASQ1P31415 396 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 DNAJC21Q5F1R6 531 aaKnown RBP10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 SPC24Q8NBT2 197 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 COG6Q9Y2V7 657 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 TNMDQ9H2S6 317 aa10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
PPFIA2-220ENST00000550584 TRDNQ13061 729 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 API5Q9BZZ5 524 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 SYCP1Q15431 976 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC150Q8NCX0 1101 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 CCDC144AA2RUR9 1427 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 HMGB1P1B2RPK0 211 aaPredicted RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 SLU7O95391 586 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 PSMA5P28066 241 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 RBBP5Q15291 538 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 SEPT14Q6ZU15 432 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 LUC7LQ9NQ29 371 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 CTAGE5O15320 804 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 RPAINQ86UA6 219 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 ZNF526Q8TF50 670 aaPredicted RBP10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 ARFGAP3Q9NP61 516 aa10.36□□□□□ -0.75
PPFIA2-220ENST00000550584 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 EBAG9O00559 213 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 SRPK2P78362 688 aaKnown RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 NUP62CLQ9H1M0 184 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 B4GALNT4Q76KP1 1039 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 SPATS2Q86XZ4 545 aaKnown RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 ERCC3P19447 782 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 MEX3CQ5U5Q3 659 aaKnown RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 TNPO1Q92973 898 aaKnown RBP10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 KIF3BO15066 747 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 YY1AP1Q9H869 796 aa10.35□□□□□ -0.75
PPFIA2-220ENST00000550584 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 FAM114A1Q8IWE2 563 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 ANKRD18BA2A2Z9 1011 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 VGLL3A8MV65 326 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 KRT85P78386 507 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 SH2D4BQ5SQS7 431 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 C10orf67Q8IYJ2 551 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 SYCE3A1L190 88 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 KIF3CO14782 793 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 ZNF853P0CG23 659 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 SPECC1LQ69YQ0 1117 aa10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 ZSCAN31Q96LW9 406 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-220ENST00000550584 KIF5BP33176 963 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 L3MBTL2Q969R5 705 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 SNX21Q969T3 373 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 TUBB2AQ13885 445 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 TUBB2BQ9BVA1 445 aa10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 SPATS2LQ9NUQ6 558 aaKnown RBP10.33□□□□□ -0.76
PPFIA2-220ENST00000550584 KRBA2Q6ZNG9 492 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms